FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG14156-RA through 18771 annotations produced 1 hits

Odorant receptor 67c (Or67c):

Annotation Number : CG14156
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036078
Gbrowse : chr3L:10236419-10237806 (-) // 100.0 //
Probeset : 1638525_at
Accessions : protein= NP_524018;, nucleotide= NM_079294;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0036078.
BioGrid reports that CG14156 interacts with CG4003 .
VDRC has 2 RNAi stocks for FBgn0036078 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	2.90	None
Head	6 ± 0	2 of 4	5.20	Up
Eye	3 ± 0	0 of 4	2.45	Up
Thoracicoabdominal ganglion	2 ± 1	0 of 4	1.90	None
Salivary gland	9 ± 0	0 of 4	7.71	Up
Crop	3 ± 0	0 of 4	2.80	None
Midgut	2 ± 0	0 of 4	1.70	None
Tubule	1 ± 0	0 of 4	1.40	None
Hindgut	2 ± 0	0 of 4	1.80	None
Heart	3 ± 1	0 of 4	2.76	None
Fat body	8 ± 1	2 of 4	6.69	Up
Ovary	3 ± 0	1 of 4	2.60	Up
Testis	1 ± 0	1 of 4	1.30	None
Male accessory glands	6 ± 1	0 of 4	5.60	None
Virgin spermatheca	3 ± 0	0 of 4	3.12	Up
Mated spermatheca	1 ± 0	0 of 4	1.31	None
Adult carcass	4 ± 0	0 of 4	3.60	Up
Larval CNS	3 ± 0	1 of 4	2.57	Up
Larval Salivary gland	1 ± 0	0 of 4	1.04	None
Larval midgut	2 ± 0	0 of 4	1.71	None
Larval tubule	3 ± 0	0 of 4	2.80	Up
Larval hindgut	2 ± 1	0 of 4	2.37	None
Larval fat body	5 ± 1	1 of 4	4.70	None
Larval trachea	2 ± 1	0 of 4	2.31	None
Larval carcass	3 ± 1	0 of 4	2.96	None
S2 cells (growing)	3 ± 1	0 of 4	3.02	None
Whole fly	1 ± 0	0 of 4

Looking for CG14156-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720