FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG14222-RA through 18771 annotations produced 1 hits

(CG14222):

Annotation Number : CG14222
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031043
Gbrowse : chrX:19515478-19517105 (-) // 100.0 //
Probeset : 1628976_at
Accessions : protein= NP_608331;, nucleotide= NM_134487;
Interpro : 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008415 // acyltransferase activity /
FlyMine data for FBgn0031043.
BDGP gene expression has embryonic in situ data for CG14222: 17 pix of staining in 14 body parts.
BioGrid reports that CG14222 interacts with CG3510 CG7008 CG8280 CG18816 CG30160 .
TRiP has 1 RNAi stocks for FBgn0031043 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031043 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	280 ± 8	4 of 4	1.20	Up
Head	212 ± 8	4 of 4	0.90	None
Eye	177 ± 11	4 of 4	0.74	Down
Thoracicoabdominal ganglion	215 ± 6	4 of 4	0.90	None
Salivary gland	171 ± 12	4 of 4	0.71	Down
Crop	247 ± 2	4 of 4	1.00	None
Midgut	249 ± 4	4 of 4	1.00	None
Tubule	237 ± 10	4 of 4	1.00	None
Hindgut	146 ± 7	4 of 4	0.60	Down
Heart	126 ± 8	4 of 4	0.53	Down
Fat body	224 ± 16	4 of 4	0.93	None
Ovary	460 ± 6	4 of 4	1.90	Up
Testis	53 ± 3	4 of 4	0.20	Down
Male accessory glands	309 ± 11	4 of 4	1.30	Up
Virgin spermatheca	179 ± 5	4 of 4	0.75	Down
Mated spermatheca	172 ± 2	4 of 4	0.72	Down
Adult carcass	175 ± 5	4 of 4	0.70	Down
Larval CNS	295 ± 14	4 of 4	1.23	Up
Larval Salivary gland	286 ± 2	4 of 4	1.19	Up
Larval midgut	168 ± 12	4 of 4	0.70	Down
Larval tubule	233 ± 4	4 of 4	1.00	None
Larval hindgut	202 ± 14	4 of 4	0.84	None
Larval fat body	237 ± 18	4 of 4	1.00	None
Larval trachea	285 ± 25	4 of 4	1.19	Up
Larval carcass	256 ± 11	4 of 4	1.07	None
S2 cells (growing)	333 ± 9	4 of 4	1.39	Up
Whole fly	240 ± 10	4 of 4

Looking for CG14222-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720