FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG14238-RA through 18771 annotations produced 1 hits

(CG14238):

Annotation Number : CG14238
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039429
Gbrowse : chr3R:22284074-22286469 (+) // 100.0 //
Probeset : 1624016_at
Accessions : protein= NP_651480;, nucleotide= NM_143223;
FlyMine data for FBgn0039429.
VDRC has 1 RNAi stocks for FBgn0039429 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.50	None
Head	0 ± 0	0 of 4	0.20	None
Eye	2 ± 0	0 of 4	0.77	None
Thoracicoabdominal ganglion	7 ± 2	0 of 4	1.80	None
Salivary gland	11 ± 4	0 of 4	2.97	None
Crop	6 ± 2	1 of 4	1.60	None
Midgut	4 ± 0	0 of 4	1.20	None
Tubule	3 ± 1	0 of 4	1.00	None
Hindgut	6 ± 1	0 of 4	1.70	None
Heart	4 ± 1	0 of 4	1.29	None
Fat body	5 ± 2	0 of 4	1.46	None
Ovary	3 ± 1	0 of 4	0.80	None
Testis	1 ± 0	0 of 4	0.30	None
Male accessory glands	7 ± 2	0 of 4	2.00	None
Virgin spermatheca	7 ± 1	0 of 4	1.81	None
Mated spermatheca	5 ± 1	0 of 4	1.37	None
Adult carcass	4 ± 1	0 of 4	1.10	None
Larval CNS	3 ± 0	0 of 4	0.85	None
Larval Salivary gland	7 ± 2	0 of 4	1.87	None
Larval midgut	5 ± 1	0 of 4	1.29	None
Larval tubule	6 ± 1	0 of 4	1.60	None
Larval hindgut	8 ± 0	0 of 4	2.08	None
Larval fat body	8 ± 2	0 of 4	2.20	None
Larval trachea	1 ± 0	0 of 4	0.29	None
Larval carcass	6 ± 1	0 of 4	1.60	None
S2 cells (growing)	4 ± 0	0 of 4	1.25	None
Whole fly	3 ± 1	0 of 4

Looking for CG14238-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720