Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG14352-RA through 18771 annotations produced 1 hits



(CG14352):

Annotation Number : CG14352
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031351
Gbrowse : chr2L:1611420-1612579 (+) // 100.0 //
Probeset : 1627207_at
Accessions : protein= NP_608609;, nucleotide= NM_134765;
Interpro : 0003677 // DNA binding // inferred from electronic annotation
FlyMine data for FBgn0031351.
BDGP gene expression has embryonic in situ data for CG14352: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0031351 available for purchase.
VDRC has 4 RNAi stocks for FBgn0031351 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain46 ± 14 of 4 0.70Down
Head20 ± 24 of 4 0.30Down
Eye13 ± 04 of 4 0.21Down
Thoracicoabdominal ganglion39 ± 24 of 4 0.60Down
Salivary gland20 ± 52 of 4 0.31Down
Crop23 ± 34 of 4 0.40Down
Midgut12 ± 12 of 4 0.20Down
Tubule14 ± 13 of 4 0.20Down
Hindgut17 ± 14 of 4 0.30Down
Heart9 ± 13 of 4 0.14Down
Fat body9 ± 01 of 4 0.14Down
Ovary144 ± 44 of 4 2.20Up
Testis29 ± 44 of 4 0.50Down
Male accessory glands11 ± 12 of 4 0.20Down
Virgin spermatheca11 ± 22 of 4 0.17Down
Mated spermatheca14 ± 13 of 4 0.22Down
Adult carcass19 ± 32 of 4 0.30Down
Larval CNS44 ± 54 of 4 0.68Down
Larval Salivary gland18 ± 14 of 4 0.28Down
Larval midgut10 ± 21 of 4 0.16Down
Larval tubule25 ± 24 of 4 0.40Down
Larval hindgut10 ± 23 of 4 0.16Down
Larval fat body19 ± 24 of 4 0.30Down
Larval trachea16 ± 14 of 4 0.25Down
Larval carcass10 ± 02 of 4 0.16Down
S2 cells (growing)36 ± 14 of 4 0.56Down
Whole fly64 ± 44 of 4

Looking for CG14352-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime