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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG14651-RA through 18771 annotations produced 1 hits



/// (CG14651 /// DsecGM10760):

Annotation Number : CG14651
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037254
Gbrowse : chr3R:306533-309780 (+) // 100.0 //
Probeset : 1626111_at
Accessions : protein= NP_649475;, nucleotide= NM_141218;
FlyMine data for FBgn0037254.
BDGP gene expression has embryonic in situ data for CG14651: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0037254 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 0.40Down
Head4 ± 10 of 4 0.40Down
Eye0 ± 00 of 4 0.05Down
Thoracicoabdominal ganglion5 ± 10 of 4 0.50Down
Salivary gland13 ± 61 of 4 1.21None
Crop3 ± 11 of 4 0.30Down
Midgut6 ± 10 of 4 0.50Down
Tubule5 ± 00 of 4 0.50Down
Hindgut4 ± 00 of 4 0.40Down
Heart2 ± 10 of 4 0.19Down
Fat body3 ± 21 of 4 0.36Down
Ovary3 ± 11 of 4 0.30Down
Testis87 ± 54 of 4 8.00Up
Male accessory glands6 ± 21 of 4 0.60None
Virgin spermatheca4 ± 10 of 4 0.38Down
Mated spermatheca2 ± 00 of 4 0.26Down
Adult carcass4 ± 10 of 4 0.40Down
Larval CNS3 ± 21 of 4 0.28Down
Larval Salivary gland3 ± 10 of 4 0.28Down
Larval midgut6 ± 01 of 4 0.63Down
Larval tubule4 ± 11 of 4 0.40Down
Larval hindgut4 ± 10 of 4 0.38Down
Larval fat body15 ± 52 of 4 1.40None
Larval trachea4 ± 10 of 4 0.43Down
Larval carcass6 ± 01 of 4 0.63Down
S2 cells (growing)4 ± 10 of 4 0.39Down
Whole fly10 ± 04 of 4

Looking for CG14651-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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