Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG14688-RA through 18771 annotations produced 1 hits



(CG14688):

Annotation Number : CG14688
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037819
Gbrowse : chr3R:6503608-6504899 (-) // 100.0 //
Probeset : 1635321_at
Accessions : protein= NP_001097740;, nucleotide= NM_001104270;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037819.
BioGrid reports that CG14688 interacts with CG4349 .
VDRC has 1 RNAi stocks for FBgn0037819 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain236 114 of 4 1.10None
Head541 604 of 4 2.40Up
Eye124 204 of 4 0.56Down
Thoracicoabdominal ganglion395 184 of 4 1.80Up
Salivary gland502 384 of 4 2.27Up
Crop199 54 of 4 0.90None
Midgut205 44 of 4 0.90None
Tubule252 304 of 4 1.10None
Hindgut93 34 of 4 0.40Down
Heart850 334 of 4 3.84Up
Fat body1133 1494 of 4 5.12Up
Ovary168 94 of 4 0.80Down
Testis23 14 of 4 0.10Down
Male accessory glands73 44 of 4 0.30Down
Virgin spermatheca1151 1064 of 4 5.20Up
Mated spermatheca1492 1734 of 4 6.75Up
Adult carcass726 614 of 4 3.30Up
Larval CNS44 204 of 4 0.20Down
Larval Salivary gland46 54 of 4 0.21Down
Larval midgut96 114 of 4 0.44Down
Larval tubule35 104 of 4 0.20Down
Larval hindgut90 84 of 4 0.41Down
Larval fat body513 1014 of 4 2.30None
Larval trachea20 44 of 4 0.09Down
Larval carcass348 534 of 4 1.58None
S2 cells (growing)0 00 of 4 0.00Down
Whole fly221 114 of 4

Looking for CG14688-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime