FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG14692-RA through 18771 annotations produced 1 hits

(CG14692):

Annotation Number : CG14692
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037836
Gbrowse : chr3R:6620063-6621023 (-) // 100.0 //
Probeset : 1631147_at
Accessions : protein= NP_650019;, nucleotide= NM_141762;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008603 // cAMP-dependent protein kinase regulator
FlyMine data for FBgn0037836.
BioGrid reports that CG14692 interacts with CG2200 CG4319 .
VDRC has 2 RNAi stocks for FBgn0037836 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	2.10	None
Head	16 ± 2	3 of 4	16.80	Up
Eye	2 ± 1	0 of 4	2.67	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	5.00	None
Salivary gland	8 ± 5	0 of 4	8.69	None
Crop	5 ± 1	1 of 4	5.40	Up
Midgut	1 ± 0	0 of 4	1.00	None
Tubule	3 ± 0	0 of 4	3.30	Up
Hindgut	2 ± 1	0 of 4	2.50	None
Heart	1 ± 1	0 of 4	1.85	None
Fat body	3 ± 2	0 of 4	3.03	None
Ovary	3 ± 0	0 of 4	3.60	None
Testis	6 ± 1	0 of 4	7.00	Up
Male accessory glands	9 ± 1	0 of 4	9.80	Up
Virgin spermatheca	1 ± 0	0 of 4	1.10	None
Mated spermatheca	6 ± 3	0 of 4	6.13	None
Adult carcass	5 ± 2	0 of 4	5.80	None
Larval CNS	2 ± 1	0 of 4	2.28	None
Larval Salivary gland	1 ± 0	0 of 4	1.21	None
Larval midgut	0 ± 0	0 of 4	0.69	None
Larval tubule	3 ± 2	0 of 4	3.80	None
Larval hindgut	1 ± 0	0 of 4	1.08	None
Larval fat body	4 ± 1	0 of 4	5.00	None
Larval trachea	3 ± 2	0 of 4	3.36	None
Larval carcass	4 ± 0	0 of 4	4.62	Up
S2 cells (growing)	1 ± 0	0 of 4	1.36	None
Whole fly	1 ± 0	0 of 4

Looking for CG14692-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720