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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG14795-RB through 18771 annotations produced 1 hits



/// /// (CG14795 /// DmauCG14795 /// DsimCG14795):

Annotation Number : CG14795
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025393
Gbrowse : chrX:1406328-1406832 (-) // 100.0 //
Probeset : 1626242_at
Accessions : protein= NP_569925;, nucleotide= NM_130569;
FlyMine data for FBgn0025393.
BioGrid reports that CG14795 interacts with CG8900 .
VDRC has 3 RNAi stocks for FBgn0025393 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain14 ± 14 of 4 1.80Up
Head14 ± 23 of 4 1.80Up
Eye10 ± 12 of 4 1.27None
Thoracicoabdominal ganglion14 ± 13 of 4 1.80Up
Salivary gland17 ± 30 of 4 2.13None
Crop5 ± 10 of 4 0.70None
Midgut9 ± 20 of 4 1.10None
Tubule3 ± 00 of 4 0.40Down
Hindgut6 ± 20 of 4 0.80None
Heart3 ± 01 of 4 0.39Down
Fat body7 ± 31 of 4 0.90None
Ovary5 ± 11 of 4 0.60None
Testis4 ± 00 of 4 0.50None
Male accessory glands2 ± 00 of 4 0.30Down
Virgin spermatheca6 ± 01 of 4 0.76None
Mated spermatheca5 ± 11 of 4 0.72None
Adult carcass10 ± 30 of 4 1.30None
Larval CNS20 ± 24 of 4 2.63Up
Larval Salivary gland4 ± 20 of 4 0.54None
Larval midgut11 ± 31 of 4 1.49None
Larval tubule1 ± 00 of 4 0.20Down
Larval hindgut24 ± 13 of 4 3.12Up
Larval fat body3 ± 00 of 4 0.40Down
Larval trachea71 ± 114 of 4 8.91Up
Larval carcass854 ± 764 of 4107.10Up
S2 cells (growing)233 ± 54 of 429.23Up
Whole fly8 ± 12 of 4

Looking for CG14795-RB. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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