FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG14855-RA through 18771 annotations produced 1 hits

(CG14855):

Annotation Number : CG14855
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038260
Gbrowse : chr3R:10622028-10624193 (+) // 100.0 //
Probeset : 1639504_at
Accessions : protein= NP_650390;, nucleotide= NM_142133;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0038260.
Homophila reports that CG14855 is a close match (2e-11) to human gene OAT4L;SLC22A12;URAT1 (NP_700357), a gene associated with Hypouricemia, renal, 220150 (3).
BioGrid reports that CG14855 interacts with CG9757 Dmel CG34380 .
VDRC has 1 RNAi stocks for FBgn0038260 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	45 ± 2	4 of 4	4.90	Up
Head	25 ± 2	2 of 4	2.80	Up
Eye	9 ± 2	0 of 4	1.05	None
Thoracicoabdominal ganglion	25 ± 1	0 of 4	2.70	Up
Salivary gland	18 ± 3	0 of 4	1.95	None
Crop	9 ± 2	0 of 4	1.00	None
Midgut	13 ± 2	0 of 4	1.50	None
Tubule	25 ± 1	2 of 4	2.70	Up
Hindgut	15 ± 2	0 of 4	1.60	None
Heart	78 ± 3	4 of 4	8.43	Up
Fat body	11 ± 4	0 of 4	1.26	None
Ovary	6 ± 0	0 of 4	0.70	Down
Testis	11 ± 1	0 of 4	1.30	None
Male accessory glands	12 ± 3	0 of 4	1.40	None
Virgin spermatheca	12 ± 2	0 of 4	1.39	None
Mated spermatheca	10 ± 0	0 of 4	1.10	None
Adult carcass	19 ± 1	0 of 4	2.10	Up
Larval CNS	93 ± 9	4 of 4	10.04	Up
Larval Salivary gland	18 ± 3	0 of 4	2.02	None
Larval midgut	16 ± 1	0 of 4	1.77	Up
Larval tubule	54 ± 2	4 of 4	5.90	Up
Larval hindgut	19 ± 3	0 of 4	2.04	None
Larval fat body	6 ± 1	0 of 4	0.70	None
Larval trachea	16 ± 3	1 of 4	1.81	Up
Larval carcass	193 ± 43	4 of 4	20.91	Up
S2 cells (growing)	11 ± 1	1 of 4	1.27	None
Whole fly	9 ± 0	0 of 4

Looking for CG14855-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720