FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1486-RA through 18771 annotations produced 1 hits

(CG1486):

Annotation Number : CG1486
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031174
Gbrowse : chrX:21195071-21199176 (+) // 100.0 //
Probeset : 1636928_s_at
Accessions : protein= NP_608450; /// NP_728413;, nucleotide= NM_134606; /// NM_167743;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from phy
FlyMine data for FBgn0031174.
BDGP gene expression has embryonic in situ data for CG1486: 18 pix of staining in 6 body parts.
BioGrid reports that CG1486 interacts with CG15150 CG15712 CG7712 CG4116 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	343 ± 16	4 of 4	2.30	Up
Head	195 ± 11	4 of 4	1.30	Up
Eye	111 ± 7	4 of 4	0.76	Down
Thoracicoabdominal ganglion	318 ± 11	4 of 4	2.20	Up
Salivary gland	1759 ± 54	4 of 4	12.04	Up
Crop	182 ± 7	4 of 4	1.20	Up
Midgut	326 ± 9	4 of 4	2.20	Up
Tubule	325 ± 16	4 of 4	2.20	Up
Hindgut	246 ± 4	4 of 4	1.70	Up
Heart	112 ± 7	4 of 4	0.77	Down
Fat body	254 ± 13	4 of 4	1.74	Up
Ovary	205 ± 1	4 of 4	1.40	Up
Testis	33 ± 4	4 of 4	0.20	Down
Male accessory glands	1015 ± 40	4 of 4	6.90	Up
Virgin spermatheca	385 ± 14	4 of 4	2.64	Up
Mated spermatheca	414 ± 11	4 of 4	2.84	Up
Adult carcass	134 ± 5	4 of 4	0.90	None
Larval CNS	348 ± 31	4 of 4	2.39	Up
Larval Salivary gland	1360 ± 99	4 of 4	9.31	Up
Larval midgut	411 ± 8	4 of 4	2.82	Up
Larval tubule	327 ± 9	4 of 4	2.20	Up
Larval hindgut	350 ± 7	4 of 4	2.40	Up
Larval fat body	182 ± 14	4 of 4	1.20	None
Larval trachea	132 ± 18	4 of 4	0.90	None
Larval carcass	245 ± 8	4 of 4	1.68	Up
S2 cells (growing)	299 ± 11	4 of 4	2.05	Up
Whole fly	146 ± 8	4 of 4

Looking for CG1486-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720