FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG14897-RA through 18771 annotations produced 1 hits

CG14896 (CG42232):

Annotation Number : CG14897
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250754
Gbrowse : chr3R:12292740-12295350 (-) // 100.0 //
Probeset : 1635452_a_at
Accessions : protein= NP_001138060;, nucleotide= NM_001144588;
FlyMine data for FBgn0250754.
TRiP has 2 RNAi stocks for FBgn0250754 available for purchase.
VDRC has 4 RNAi stocks for FBgn0250754 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 1	4 of 4	1.30	None
Head	6 ± 1	1 of 4	0.60	Down
Eye	3 ± 1	0 of 4	0.33	Down
Thoracicoabdominal ganglion	11 ± 1	4 of 4	1.00	None
Salivary gland	14 ± 3	1 of 4	1.28	None
Crop	8 ± 1	1 of 4	0.70	None
Midgut	10 ± 1	3 of 4	0.90	None
Tubule	7 ± 0	1 of 4	0.60	Down
Hindgut	11 ± 1	3 of 4	1.00	None
Heart	6 ± 0	2 of 4	0.55	Down
Fat body	8 ± 3	3 of 4	0.78	None
Ovary	16 ± 1	4 of 4	1.50	Up
Testis	9 ± 1	3 of 4	0.80	None
Male accessory glands	9 ± 2	0 of 4	0.80	None
Virgin spermatheca	7 ± 1	3 of 4	0.69	Down
Mated spermatheca	7 ± 1	3 of 4	0.64	Down
Adult carcass	7 ± 1	0 of 4	0.70	None
Larval CNS	10 ± 1	4 of 4	0.92	None
Larval Salivary gland	10 ± 0	0 of 4	0.97	None
Larval midgut	7 ± 0	1 of 4	0.63	Down
Larval tubule	6 ± 1	0 of 4	0.60	None
Larval hindgut	6 ± 1	3 of 4	0.57	None
Larval fat body	11 ± 2	1 of 4	1.10	None
Larval trachea	12 ± 1	4 of 4	1.08	None
Larval carcass	8 ± 1	3 of 4	0.80	None
S2 cells (growing)	13 ± 0	4 of 4	1.21	None
Whole fly	11 ± 0	4 of 4

Looking for CG14897-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720