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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG14925-RA through 18771 annotations produced 1 hits



Osiris (Osi21):

Annotation Number : CG14925
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032359
Gbrowse : chr2L:11284585-11285603 (-) // 100.0 //
Probeset : 1640345_at
Accessions : protein= NP_609501;, nucleotide= NM_135657;
FlyMine data for FBgn0032359.
VDRC has 3 RNAi stocks for FBgn0032359 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.50None
Head5 ± 10 of 4 0.80None
Eye2 ± 00 of 4 0.41None
Thoracicoabdominal ganglion2 ± 00 of 4 0.40None
Salivary gland5 ± 30 of 4 0.82None
Crop2 ± 00 of 4 0.40None
Midgut25 ± 00 of 4 3.90Up
Tubule5 ± 10 of 4 0.90None
Hindgut4 ± 20 of 4 0.70None
Heart1 ± 00 of 4 0.22None
Fat body3 ± 00 of 4 0.56None
Ovary2 ± 00 of 4 0.40None
Testis8 ± 20 of 4 1.30None
Male accessory glands2 ± 00 of 4 0.40None
Virgin spermatheca3 ± 10 of 4 0.47None
Mated spermatheca4 ± 20 of 4 0.73None
Adult carcass3 ± 10 of 4 0.60None
Larval CNS4 ± 30 of 4 0.66None
Larval Salivary gland4 ± 10 of 4 0.67None
Larval midgut15 ± 20 of 4 2.34None
Larval tubule3 ± 00 of 4 0.50None
Larval hindgut1 ± 00 of 4 0.27None
Larval fat body9 ± 20 of 4 1.50None
Larval trachea2 ± 10 of 4 0.32None
Larval carcass8 ± 10 of 4 1.39None
S2 cells (growing)7 ± 10 of 4 1.19None
Whole fly6 ± 20 of 4

Looking for CG14925-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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