Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1495-RH through 18771 annotations produced 1 hits



calmodulin-dependent kinase (CaMKI):

Annotation Number : CG1495
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016126
Gbrowse : chr4:466119-474566 (+) // 100.0 //
Probeset : 1637380_s_at
Accessions : protein= NP_524622; /// NP_726569; /// NP_726570; /// NP_726571; /// NP_726572; /// NP_726573; /// NP_726574;, nucleotide= NM_079883; /// NM_166759; /// NM_166760; /// NM_166761; /// NM_166762; /// NM_166763; /// NM_166764;
Pathway : 0005829 // cytosol // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0016126.
Homophila reports that CG1495 is a close match (7e-11) to human gene PINK1;PARK6 (NP_115785), a gene associated with Parkinson disease 6, early onset, 605909 (3).
TRiP has 3 RNAi stocks for FBgn0016126 available for purchase.
VDRC has 1 RNAi stocks for FBgn0016126 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1587 ± 604 of 4 2.20Up
Head1525 ± 1284 of 4 2.10Up
Eye1173 ± 294 of 4 1.62Up
Thoracicoabdominal ganglion1786 ± 304 of 4 2.50Up
Salivary gland317 ± 244 of 4 0.44Down
Crop1965 ± 314 of 4 2.70Up
Midgut263 ± 94 of 4 0.40Down
Tubule92 ± 124 of 4 0.10Down
Hindgut985 ± 174 of 4 1.40Up
Heart1955 ± 454 of 4 2.70Up
Fat body3622 ± 1784 of 4 5.01Up
Ovary417 ± 84 of 4 0.60Down
Testis78 ± 34 of 4 0.10Down
Male accessory glands398 ± 154 of 4 0.60Down
Virgin spermatheca3894 ± 554 of 4 5.39Up
Mated spermatheca3183 ± 904 of 4 4.40Up
Adult carcass1747 ± 794 of 4 2.40Up
Larval CNS1270 ± 804 of 4 1.76Up
Larval Salivary gland1240 ± 464 of 4 1.71Up
Larval midgut247 ± 184 of 4 0.34Down
Larval tubule150 ± 104 of 4 0.20Down
Larval hindgut816 ± 104 of 4 1.13None
Larval fat body3634 ± 3364 of 4 5.00Up
Larval trachea989 ± 334 of 4 1.37Up
Larval carcass757 ± 374 of 4 1.05None
S2 cells (growing)270 ± 64 of 4 0.37Down
Whole fly723 ± 434 of 4

Looking for CG1495-RH. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime