Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG14980-RB through 18771 annotations produced 1 hits



(CG14980):

Annotation Number : CG14980
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035470
Gbrowse : chr3L:3897437-3899156 (-) // 100.0 //
Probeset : 1626344_at
Accessions : protein= NP_647835;, nucleotide= NM_139578;
FlyMine data for FBgn0035470.
BDGP gene expression has embryonic in situ data for CG14980: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0035470 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain82 ± 24 of 4 2.00Up
Head47 ± 54 of 4 1.10None
Eye78 ± 44 of 4 1.89Up
Thoracicoabdominal ganglion81 ± 34 of 4 2.00Up
Salivary gland142 ± 114 of 4 3.43Up
Crop92 ± 14 of 4 2.20Up
Midgut67 ± 24 of 4 1.60Up
Tubule66 ± 14 of 4 1.60Up
Hindgut96 ± 44 of 4 2.30Up
Heart52 ± 34 of 4 1.26Up
Fat body38 ± 34 of 4 0.93None
Ovary41 ± 24 of 4 1.00None
Testis74 ± 24 of 4 1.80Up
Male accessory glands57 ± 54 of 4 1.40None
Virgin spermatheca37 ± 24 of 4 0.91None
Mated spermatheca47 ± 74 of 4 1.14None
Adult carcass43 ± 42 of 4 1.10None
Larval CNS55 ± 34 of 4 1.35Up
Larval Salivary gland82 ± 54 of 4 1.98Up
Larval midgut50 ± 34 of 4 1.22None
Larval tubule111 ± 04 of 4 2.70Up
Larval hindgut69 ± 44 of 4 1.67Up
Larval fat body64 ± 84 of 4 1.60None
Larval trachea42 ± 44 of 4 1.02None
Larval carcass42 ± 34 of 4 1.03None
S2 cells (growing)40 ± 44 of 4 0.98None
Whole fly41 ± 24 of 4

Looking for CG14980-RB. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime