Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15010-RC through 18771 annotations produced 1 hits



archipelago (ago):

Annotation Number : CG15010
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041171
Gbrowse : chr3L:4246329-4254309 (-) // 99.93 //
Probeset : 1633515_s_at
Accessions : protein= NP_523922; /// NP_728964; /// NP_728965;, nucleotide= NM_079198; /// NM_168072; /// NM_168073;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // non-traceable a
Interpro : 0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0005515 // protein b
FlyMine data for FBgn0041171.
Homophila reports that CG15010 is a close match (5e-15) to human gene PEX7;RCDP1 (NP_000279), a gene associated with Refsum disease, 266500 (3);Rhizomelic chondrodysplasia punctata, type 1, 215100 (3).
BioGrid reports that CG15010 interacts with CG15529 CG16983 CG4998 CG6779 CG3938 .
TRiP has 2 RNAi stocks for FBgn0041171 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain239 ± 74 of 4 1.10None
Head153 ± 44 of 4 0.70Down
Eye225 ± 114 of 4 1.02None
Thoracicoabdominal ganglion219 ± 54 of 4 1.00None
Salivary gland221 ± 204 of 4 1.00None
Crop211 ± 84 of 4 1.00None
Midgut180 ± 64 of 4 0.80Down
Tubule279 ± 24 of 4 1.30Up
Hindgut176 ± 44 of 4 0.80Down
Heart186 ± 84 of 4 0.84Down
Fat body207 ± 234 of 4 0.94None
Ovary490 ± 84 of 4 2.20Up
Testis334 ± 84 of 4 1.50Up
Male accessory glands126 ± 34 of 4 0.60Down
Virgin spermatheca407 ± 164 of 4 1.84Up
Mated spermatheca459 ± 234 of 4 2.08Up
Adult carcass135 ± 64 of 4 0.60Down
Larval CNS409 ± 334 of 4 1.85Up
Larval Salivary gland550 ± 124 of 4 2.49Up
Larval midgut171 ± 124 of 4 0.78Down
Larval tubule292 ± 194 of 4 1.30Up
Larval hindgut217 ± 74 of 4 0.98None
Larval fat body379 ± 274 of 4 1.70Up
Larval trachea269 ± 84 of 4 1.22Up
Larval carcass300 ± 164 of 4 1.36Up
S2 cells (growing)297 ± 64 of 4 1.34Up
Whole fly221 ± 74 of 4

Looking for CG15010-RC. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime