FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG15064-RA through 18771 annotations produced 1 hits

Holes in muscle (Him):

Annotation Number : CG15064
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030900
Gbrowse : chrX:18103463-18104777 (+) // 100.0 //
Probeset : 1628247_at
Accessions : protein= NP_573273;, nucleotide= NM_133045;
FlyMine data for FBgn0030900.
BDGP gene expression has embryonic in situ data for CG15064: 64 pix of staining in 12 body parts.
TRiP has 1 RNAi stocks for FBgn0030900 available for purchase.
VDRC has 3 RNAi stocks for FBgn0030900 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.20	Down
Head	2 ± 1	0 of 4	0.30	Down
Eye	3 ± 2	0 of 4	0.36	None
Thoracicoabdominal ganglion	1 ± 1	0 of 4	0.20	Down
Salivary gland	6 ± 2	0 of 4	0.78	None
Crop	4 ± 1	0 of 4	0.50	None
Midgut	3 ± 1	0 of 4	0.40	None
Tubule	2 ± 0	0 of 4	0.30	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	3 ± 1	0 of 4	0.36	None
Fat body	2 ± 1	0 of 4	0.32	None
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	28 ± 1	1 of 4	3.30	Up
Male accessory glands	6 ± 3	0 of 4	0.70	None
Virgin spermatheca	3 ± 1	0 of 4	0.40	None
Mated spermatheca	5 ± 0	0 of 4	0.60	None
Adult carcass	8 ± 3	0 of 4	1.00	None
Larval CNS	0 ± 0	0 of 4	0.06	Down
Larval Salivary gland	1 ± 0	0 of 4	0.20	Down
Larval midgut	4 ± 2	0 of 4	0.55	None
Larval tubule	2 ± 1	0 of 4	0.30	Down
Larval hindgut	1 ± 0	0 of 4	0.14	Down
Larval fat body	9 ± 2	0 of 4	1.00	None
Larval trachea	4 ± 4	1 of 4	0.50	None
Larval carcass	2 ± 1	0 of 4	0.30	None
S2 cells (growing)	1 ± 0	0 of 4	0.18	Down
Whole fly	8 ± 2	0 of 4

Looking for CG15064-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720