Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15093-RC through 18771 annotations produced 1 hits



(CG15093):

Annotation Number : CG15093
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034390
Gbrowse : chr2R:14663173-14664546 (-) // 100.0 //
Probeset : 1630236_s_at
Accessions : protein= NP_611373; /// NP_725824; /// NP_725825;, nucleotide= NM_137529; /// NM_166306; /// NM_166307;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceabl
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (deca
FlyMine data for FBgn0034390.
BDGP gene expression has embryonic in situ data for CG15093: 4 pix of staining in 1 body parts.
BioGrid reports that CG15093 interacts with CG18128 .
VDRC has 1 RNAi stocks for FBgn0034390 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain61 44 of 4 0.10Down
Head902 464 of 4 1.30Up
Eye847 654 of 4 1.22None
Thoracicoabdominal ganglion78 44 of 4 0.10Down
Salivary gland1253 594 of 4 1.80Up
Crop490 434 of 4 0.70Down
Midgut898 344 of 4 1.30Up
Tubule3802 2874 of 4 5.50Up
Hindgut604 174 of 4 0.90Down
Heart1144 564 of 4 1.64Up
Fat body1254 2754 of 4 1.80Up
Ovary794 64 of 4 1.10Up
Testis57 34 of 4 0.10Down
Male accessory glands272 164 of 4 0.40Down
Virgin spermatheca1163 1264 of 4 1.67Up
Mated spermatheca765 1584 of 4 1.10None
Adult carcass1190 344 of 4 1.70Up
Larval CNS450 644 of 4 0.65Down
Larval Salivary gland1860 734 of 4 2.67Up
Larval midgut1212 1084 of 4 1.74Up
Larval tubule325 714 of 4 0.50Down
Larval hindgut1941 1184 of 4 2.79Up
Larval fat body36 70 of 4 0.10Down
Larval trachea1582 1024 of 4 2.27Up
Larval carcass1732 2384 of 4 2.49Up
S2 cells (growing)271 74 of 4 0.39Down
Whole fly695 304 of 4

Looking for CG15093-RC. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime