Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1514-RA through 18771 annotations produced 1 hits



snazarus (snz):

Annotation Number : CG1514
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029976
Gbrowse : chrX:7806121-7811478 (+) // 100.0 //
Probeset : 1626683_at
Accessions : protein= NP_572421;, nucleotide= NM_132193;
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred
FlyMine data for FBgn0029976.
TRiP has 1 RNAi stocks for FBgn0029976 available for purchase.
VDRC has 1 RNAi stocks for FBgn0029976 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain51 ± 24 of 4 2.10Up
Head24 ± 40 of 4 1.00None
Eye13 ± 20 of 4 0.55Down
Thoracicoabdominal ganglion32 ± 52 of 4 1.30None
Salivary gland21 ± 30 of 4 0.88None
Crop22 ± 10 of 4 0.90None
Midgut21 ± 50 of 4 0.90None
Tubule20 ± 30 of 4 0.80None
Hindgut25 ± 00 of 4 1.00None
Heart33 ± 34 of 4 1.36None
Fat body19 ± 40 of 4 0.79None
Ovary41 ± 11 of 4 1.70Up
Testis37 ± 34 of 4 1.50Up
Male accessory glands19 ± 30 of 4 0.80None
Virgin spermatheca6 ± 20 of 4 0.28Down
Mated spermatheca4 ± 20 of 4 0.19Down
Adult carcass23 ± 20 of 4 0.90None
Larval CNS21 ± 20 of 4 0.87None
Larval Salivary gland5 ± 10 of 4 0.20Down
Larval midgut65 ± 90 of 4 2.65Up
Larval tubule5 ± 20 of 4 0.20Down
Larval hindgut24 ± 10 of 4 0.99None
Larval fat body12 ± 40 of 4 0.50None
Larval trachea25 ± 52 of 4 1.05None
Larval carcass8 ± 10 of 4 0.36Down
S2 cells (growing)236 ± 64 of 4 9.56Up
Whole fly24 ± 20 of 4

Looking for CG1514-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime