FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG15173-RA through 18771 annotations produced 1 hits

(CG15173):

Annotation Number : CG15173
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032744
Gbrowse : chr2L:19043534-19045146 (-) // 100.0 //
Probeset : 1639676_at
Accessions : protein= NP_609934;, nucleotide= NM_136090;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0032744.
BDGP gene expression has embryonic in situ data for CG15173: 6 pix of staining in 1 body parts.
BioGrid reports that CG15173 interacts with CG5359 .
VDRC has 1 RNAi stocks for FBgn0032744 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	151 ± 5	4 of 4	2.30	Up
Head	83 ± 8	4 of 4	1.30	None
Eye	92 ± 3	4 of 4	1.41	Up
Thoracicoabdominal ganglion	153 ± 5	4 of 4	2.30	Up
Salivary gland	50 ± 5	4 of 4	0.78	None
Crop	61 ± 3	4 of 4	0.90	None
Midgut	54 ± 3	4 of 4	0.80	None
Tubule	84 ± 2	4 of 4	1.30	Up
Hindgut	77 ± 2	4 of 4	1.20	None
Heart	63 ± 5	4 of 4	0.97	None
Fat body	31 ± 4	4 of 4	0.48	Down
Ovary	27 ± 0	4 of 4	0.40	Down
Testis	114 ± 2	4 of 4	1.80	Up
Male accessory glands	30 ± 2	4 of 4	0.50	Down
Virgin spermatheca	37 ± 2	4 of 4	0.57	Down
Mated spermatheca	44 ± 3	4 of 4	0.68	Down
Adult carcass	141 ± 4	4 of 4	2.20	Up
Larval CNS	70 ± 8	4 of 4	1.08	None
Larval Salivary gland	42 ± 2	4 of 4	0.65	Down
Larval midgut	52 ± 4	4 of 4	0.81	None
Larval tubule	59 ± 2	4 of 4	0.90	None
Larval hindgut	70 ± 4	4 of 4	1.07	None
Larval fat body	38 ± 4	4 of 4	0.60	Down
Larval trachea	49 ± 3	4 of 4	0.76	None
Larval carcass	65 ± 3	4 of 4	1.00	None
S2 cells (growing)	68 ± 1	4 of 4	1.05	None
Whole fly	65 ± 5	4 of 4

Looking for CG15173-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720