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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15256-RA through 18771 annotations produced 1 hits



():

Annotation Number : CG15256
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr2L:15550471-15563250 (+) // 100.0 //
Probeset : 1624912_at
Accessions : protein= , nucleotide=


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 10 of 4 1.00None
Head4 10 of 4 0.80None
Eye2 10 of 4 0.47None
Thoracicoabdominal ganglion3 10 of 4 0.60None
Salivary gland6 20 of 4 1.12None
Crop8 20 of 4 1.60None
Midgut10 12 of 4 2.00Up
Tubule6 10 of 4 1.20None
Hindgut4 10 of 4 0.90None
Heart3 10 of 4 0.59None
Fat body11 42 of 4 2.12None
Ovary5 11 of 4 1.00None
Testis6 00 of 4 1.20None
Male accessory glands13 20 of 4 2.50Up
Virgin spermatheca9 10 of 4 1.67None
Mated spermatheca8 10 of 4 1.53None
Adult carcass6 40 of 4 1.20None
Larval CNS6 30 of 4 1.17None
Larval Salivary gland4 10 of 4 0.89None
Larval midgut12 11 of 4 2.21Up
Larval tubule8 10 of 4 1.60None
Larval hindgut5 10 of 4 1.00None
Larval fat body7 30 of 4 1.40None
Larval trachea4 20 of 4 0.78None
Larval carcass2 10 of 4 0.53None
S2 cells (growing)5 10 of 4 0.95None
Whole fly5 10 of 4

Looking for CG15256-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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