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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15266-RA through 18771 annotations produced 1 hits



lethal (2) 35Cc (l(2)35Cc):

Annotation Number : CG15266
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259982
Gbrowse : chr2L:15256650-15257190 (+) // 100.0 //
Probeset : 1631876_at
Accessions : protein= NP_609744;, nucleotide= NM_135900;
Pathway : 0016272 // prefoldin complex // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred fro
FlyMine data for FBgn0259982.
VDRC has 3 RNAi stocks for FBgn0259982 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain69 34 of 4 0.60Down
Head39 14 of 4 0.30Down
Eye43 34 of 4 0.38Down
Thoracicoabdominal ganglion47 14 of 4 0.40Down
Salivary gland49 64 of 4 0.43Down
Crop76 34 of 4 0.70Down
Midgut28 04 of 4 0.20Down
Tubule31 04 of 4 0.30Down
Hindgut48 24 of 4 0.40Down
Heart23 24 of 4 0.21Down
Fat body11 40 of 4 0.10Down
Ovary243 14 of 4 2.10Up
Testis88 34 of 4 0.80Down
Male accessory glands64 04 of 4 0.60Down
Virgin spermatheca13 22 of 4 0.12Down
Mated spermatheca24 23 of 4 0.21Down
Adult carcass20 42 of 4 0.20Down
Larval CNS154 74 of 4 1.33Up
Larval Salivary gland107 54 of 4 0.93None
Larval midgut18 20 of 4 0.16Down
Larval tubule84 34 of 4 0.70Down
Larval hindgut47 14 of 4 0.41Down
Larval fat body32 54 of 4 0.30Down
Larval trachea96 104 of 4 0.83Down
Larval carcass36 14 of 4 0.32Down
S2 cells (growing)75 34 of 4 0.65Down
Whole fly115 34 of 4

Looking for CG15266-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime