Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15296-RA through 18771 annotations produced 1 hits



(CG15296):

Annotation Number : CG15296
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030215
Gbrowse : chrX:10459867-10460532 (-) // 100.0 //
Probeset : 1632336_at
Accessions : protein= NP_572636;, nucleotide= NM_132408;
FlyMine data for FBgn0030215.
BDGP gene expression has embryonic in situ data for CG15296: 2 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0030215 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 12 of 4 0.10Down
Head3 ± 12 of 4 0.10Down
Eye1 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion7 ± 12 of 4 0.10Down
Salivary gland11 ± 12 of 4 0.16Down
Crop6 ± 11 of 4 0.10Down
Midgut5 ± 03 of 4 0.10Down
Tubule4 ± 10 of 4 0.10Down
Hindgut6 ± 13 of 4 0.10Down
Heart3 ± 10 of 4 0.05Down
Fat body9 ± 23 of 4 0.13Down
Ovary3 ± 02 of 4 0.00Down
Testis798 ± 54 of 410.80Up
Male accessory glands13 ± 23 of 4 0.20Down
Virgin spermatheca6 ± 12 of 4 0.09Down
Mated spermatheca8 ± 03 of 4 0.11Down
Adult carcass7 ± 11 of 4 0.10Down
Larval CNS4 ± 13 of 4 0.06Down
Larval Salivary gland7 ± 11 of 4 0.10Down
Larval midgut4 ± 00 of 4 0.06Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut2 ± 01 of 4 0.04Down
Larval fat body102 ± 414 of 4 1.40None
Larval trachea6 ± 41 of 4 0.09Down
Larval carcass5 ± 01 of 4 0.07Down
S2 cells (growing)3 ± 01 of 4 0.05Down
Whole fly73 ± 74 of 4

Looking for CG15296-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime