FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG15365-RA through 18771 annotations produced 1 hits

(CG15365):

Annotation Number : CG15365
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030077
Gbrowse : chrX:8949079-8952099 (-) // 100.0 //
Probeset : 1638490_at
Accessions : protein= NP_572516;, nucleotide= NM_132288;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotati
FlyMine data for FBgn0030077.
BioGrid reports that CG15365 interacts with CG15483 CG2061 CG32772 CG4697 CG5149 CG6147 CG7387 CG8346 CG8440 CG8609 CG33519 .
TRiP has 1 RNAi stocks for FBgn0030077 available for purchase.
VDRC has 2 RNAi stocks for FBgn0030077 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	0 of 4	1.00	None
Head	10 ± 2	0 of 4	1.30	None
Eye	10 ± 1	0 of 4	1.27	None
Thoracicoabdominal ganglion	4 ± 2	0 of 4	0.50	None
Salivary gland	11 ± 5	0 of 4	1.39	None
Crop	34 ± 3	4 of 4	4.20	Up
Midgut	18 ± 5	0 of 4	2.30	None
Tubule	3 ± 0	0 of 4	0.40	Down
Hindgut	23 ± 1	4 of 4	2.80	Up
Heart	2 ± 0	0 of 4	0.26	None
Fat body	6 ± 5	0 of 4	0.77	None
Ovary	6 ± 1	0 of 4	0.80	None
Testis	5 ± 1	0 of 4	0.70	None
Male accessory glands	9 ± 2	0 of 4	1.20	None
Virgin spermatheca	11 ± 1	0 of 4	1.43	None
Mated spermatheca	10 ± 2	0 of 4	1.20	None
Adult carcass	10 ± 0	0 of 4	1.20	None
Larval CNS	9 ± 0	0 of 4	1.11	None
Larval Salivary gland	13 ± 3	0 of 4	1.65	None
Larval midgut	2 ± 1	0 of 4	0.30	None
Larval tubule	4 ± 2	0 of 4	0.50	None
Larval hindgut	18 ± 2	0 of 4	2.23	Up
Larval fat body	9 ± 4	0 of 4	1.10	None
Larval trachea	27 ± 2	4 of 4	3.28	Up
Larval carcass	14 ± 1	0 of 4	1.79	None
S2 cells (growing)	2 ± 0	0 of 4	0.27	None
Whole fly	8 ± 2	0 of 4

Looking for CG15365-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720