Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15371-RA through 18771 annotations produced 1 hits



Gustatory receptor 8a (Gr8a):

Annotation Number : CG15371
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030108
Gbrowse : chrX:9121327-9122667 (+) // 100.0 //
Probeset : 1624233_at
Accessions : protein= NP_511097;, nucleotide= NM_078542;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0030108.
VDRC has 3 RNAi stocks for FBgn0030108 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.60None
Head8 ± 12 of 4 1.40None
Eye6 ± 11 of 4 1.03None
Thoracicoabdominal ganglion4 ± 11 of 4 0.70None
Salivary gland9 ± 20 of 4 1.63None
Crop6 ± 11 of 4 1.10None
Midgut9 ± 11 of 4 1.60None
Tubule4 ± 00 of 4 0.80None
Hindgut5 ± 11 of 4 0.90None
Heart2 ± 10 of 4 0.38Down
Fat body4 ± 10 of 4 0.79None
Ovary4 ± 02 of 4 0.70None
Testis4 ± 01 of 4 0.70None
Male accessory glands8 ± 10 of 4 1.40None
Virgin spermatheca3 ± 10 of 4 0.57None
Mated spermatheca4 ± 10 of 4 0.67None
Adult carcass18 ± 14 of 4 3.10Up
Larval CNS2 ± 11 of 4 0.38Down
Larval Salivary gland7 ± 11 of 4 1.32None
Larval midgut6 ± 11 of 4 1.11None
Larval tubule5 ± 21 of 4 0.90None
Larval hindgut5 ± 11 of 4 0.84None
Larval fat body3 ± 10 of 4 0.60None
Larval trachea1 ± 00 of 4 0.29Down
Larval carcass6 ± 10 of 4 1.07None
S2 cells (growing)2 ± 01 of 4 0.45Down
Whole fly5 ± 02 of 4

Looking for CG15371-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime