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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15377-RA through 18771 annotations produced 1 hits



Olfactory receptor 22C.1 (Or22c):

Annotation Number : CG15377
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026396
Gbrowse : chr2L:2054588-2057967 (+) // 100.0 //
Probeset : 1629341_at
Accessions : protein= NP_523454;, nucleotide= NM_078730;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0026396.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 11 of 4 1.40None
Head2 11 of 4 0.70None
Eye4 10 of 4 1.61None
Thoracicoabdominal ganglion3 10 of 4 1.30None
Salivary gland7 20 of 4 2.58None
Crop3 20 of 4 1.30None
Midgut2 00 of 4 0.80None
Tubule2 00 of 4 0.70None
Hindgut2 00 of 4 0.70None
Heart4 01 of 4 1.64None
Fat body3 10 of 4 1.17None
Ovary0 00 of 4 0.20None
Testis2 00 of 4 0.80None
Male accessory glands7 20 of 4 2.60None
Virgin spermatheca2 00 of 4 0.79None
Mated spermatheca3 00 of 4 1.36None
Adult carcass6 20 of 4 2.10None
Larval CNS1 00 of 4 0.57None
Larval Salivary gland5 10 of 4 1.89None
Larval midgut1 10 of 4 0.63None
Larval tubule1 00 of 4 0.40None
Larval hindgut2 11 of 4 0.94None
Larval fat body3 10 of 4 1.40None
Larval trachea1 10 of 4 0.50None
Larval carcass3 00 of 4 1.06None
S2 cells (growing)2 00 of 4 0.89None
Whole fly2 00 of 4

Looking for CG15377-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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