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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15381-RA through 18771 annotations produced 1 hits



dpr3 (dpr3):

Annotation Number : CG15381
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053516
Gbrowse : chr2L:2094293-2095173 (-) // 98.1 //
Probeset : 1626635_at
Accessions : protein= NP_001014459;, nucleotide= NM_001014459;
FlyMine data for FBgn0053516.
VDRC has 3 RNAi stocks for FBgn0053516 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 10 of 4 2.90Up
Head2 ± 00 of 4 0.90None
Eye2 ± 00 of 4 0.79None
Thoracicoabdominal ganglion6 ± 10 of 4 2.60None
Salivary gland4 ± 20 of 4 1.83None
Crop3 ± 10 of 4 1.20None
Midgut6 ± 10 of 4 2.40None
Tubule4 ± 00 of 4 1.60Up
Hindgut5 ± 20 of 4 2.30None
Heart2 ± 10 of 4 1.00None
Fat body3 ± 30 of 4 1.25None
Ovary2 ± 00 of 4 0.80None
Testis1 ± 00 of 4 0.70None
Male accessory glands3 ± 10 of 4 1.30None
Virgin spermatheca1 ± 00 of 4 0.50None
Mated spermatheca0 ± 00 of 4 0.30None
Adult carcass3 ± 00 of 4 1.30None
Larval CNS3 ± 10 of 4 1.21None
Larval Salivary gland3 ± 10 of 4 1.15None
Larval midgut3 ± 10 of 4 1.52None
Larval tubule5 ± 10 of 4 2.10None
Larval hindgut3 ± 10 of 4 1.16None
Larval fat body4 ± 20 of 4 1.90None
Larval trachea3 ± 30 of 4 1.20None
Larval carcass4 ± 00 of 4 1.63None
S2 cells (growing)7 ± 00 of 4 2.90Up
Whole fly2 ± 10 of 4

Looking for CG15381-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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