FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1539-RE through 18771 annotations produced 1 hits

Tropomodulin (tmod):

Annotation Number : CG1539
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0082582
Gbrowse : chr3R:26358335-26404627 (+) // 100.0 //
Probeset : 1626016_s_at
Accessions : protein= NP_001097982; /// NP_001163775; /// NP_001163776; /// NP_001163777; /// NP_477031; /// NP_477032; /// NP_733382; /// NP_733383; /// NP_733384; /// NP_733385;, nucleotide= NM_001104512; /// NM_001170304; /// NM_001170305; /// NM_001170306; /// NM_057683; /// NM_057684; /// NM_170503; /// NM_170504; /// NM_170505; /// NM_170506;
Pathway : 0005856 // cytoskeleton // inferred from electronic annotation /// 0045169 // fusome // inferred from direct assay
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0082582.
BioGrid reports that CG1539 interacts with CG6757 CG3779 .
TRiP has 2 RNAi stocks for FBgn0082582 available for purchase.
VDRC has 3 RNAi stocks for FBgn0082582 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	426 ± 7	4 of 4	1.40	Up
Head	388 ± 43	4 of 4	1.30	None
Eye	709 ± 55	4 of 4	2.40	Up
Thoracicoabdominal ganglion	397 ± 18	4 of 4	1.30	Up
Salivary gland	191 ± 15	4 of 4	0.65	Down
Crop	610 ± 8	4 of 4	2.10	Up
Midgut	180 ± 12	4 of 4	0.60	Down
Tubule	170 ± 11	4 of 4	0.60	Down
Hindgut	457 ± 15	4 of 4	1.50	Up
Heart	633 ± 54	4 of 4	2.14	Up
Fat body	113 ± 3	4 of 4	0.38	Down
Ovary	181 ± 2	4 of 4	0.60	Down
Testis	121 ± 6	4 of 4	0.40	Down
Male accessory glands	1406 ± 45	4 of 4	4.80	Up
Virgin spermatheca	60 ± 1	4 of 4	0.20	Down
Mated spermatheca	100 ± 5	4 of 4	0.34	Down
Adult carcass	565 ± 59	4 of 4	1.90	Up
Larval CNS	502 ± 33	4 of 4	1.70	Up
Larval Salivary gland	198 ± 10	4 of 4	0.67	Down
Larval midgut	271 ± 11	4 of 4	0.92	None
Larval tubule	731 ± 36	4 of 4	2.50	Up
Larval hindgut	786 ± 29	4 of 4	2.66	Up
Larval fat body	82 ± 5	4 of 4	0.30	Down
Larval trachea	386 ± 13	4 of 4	1.31	Up
Larval carcass	1493 ± 34	4 of 4	5.06	Up
S2 cells (growing)	790 ± 23	4 of 4	2.68	Up
Whole fly	295 ± 25	4 of 4

Looking for CG1539-RE. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720