FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG15403-RA through 18771 annotations produced 1 hits

(CG15403):

Annotation Number : CG15403
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031504
Gbrowse : chr2L:3128959-3129367 (+) // 100.0 //
Probeset : 1625184_at
Accessions : protein= NP_608749;, nucleotide= NM_134905;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031504.
VDRC has 2 RNAi stocks for FBgn0031504 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	Down
Head	1 ± 0	0 of 4	0.00	Down
Eye	1 ± 0	0 of 4	0.03	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.00	Down
Salivary gland	6 ± 2	0 of 4	0.12	Down
Crop	2 ± 0	0 of 4	0.00	Down
Midgut	5 ± 2	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.00	Down
Hindgut	4 ± 1	0 of 4	0.10	Down
Heart	1 ± 1	0 of 4	0.03	Down
Fat body	1 ± 0	0 of 4	0.03	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	726 ± 25	4 of 4	13.00	Up
Male accessory glands	5 ± 2	0 of 4	0.10	Down
Virgin spermatheca	2 ± 0	0 of 4	0.04	Down
Mated spermatheca	2 ± 0	0 of 4	0.04	Down
Adult carcass	6 ± 2	0 of 4	0.10	Down
Larval CNS	1 ± 1	0 of 4	0.03	Down
Larval Salivary gland	3 ± 1	0 of 4	0.06	Down
Larval midgut	2 ± 0	0 of 4	0.04	Down
Larval tubule	3 ± 0	0 of 4	0.10	Down
Larval hindgut	0 ± 0	0 of 4	0.01	Down
Larval fat body	71 ± 32	2 of 4	1.30	None
Larval trachea	3 ± 6	1 of 4	0.07	Down
Larval carcass	3 ± 0	0 of 4	0.06	Down
S2 cells (growing)	2 ± 1	0 of 4	0.04	Down
Whole fly	55 ± 3	4 of 4

Looking for CG15403-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720