Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for CG1545-RA through 18771 annotations produced 1 hits


Annotation Number : CG1545
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030259
Gbrowse : chrX:10951571-10953627 (-) // 100.0 //
Probeset : 1639176_at
Accessions : protein= NP_572677;, nucleotide= NM_132449;
FlyMine data for FBgn0030259.
BDGP gene expression has embryonic in situ data for CG1545: 4 pix of staining in 2 body parts.
VDRC has 2 RNAi stocks for FBgn0030259 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain879 174 of 483.30Up
Head279 114 of 426.50Up
Eye33 34 of 4 3.14Up
Thoracicoabdominal ganglion1126 544 of 4106.80Up
Salivary gland1 00 of 4 0.11Down
Crop20 14 of 4 1.90Up
Midgut1 00 of 4 0.10Down
Tubule1 00 of 4 0.10Down
Hindgut1 00 of 4 0.10Down
Heart0 00 of 4 0.07Down
Fat body1 10 of 4 0.15Down
Ovary0 00 of 4 0.00Down
Testis1 00 of 4 0.10Down
Male accessory glands0 00 of 4 0.10Down
Virgin spermatheca1 00 of 4 0.11Down
Mated spermatheca1 00 of 4 0.11Down
Adult carcass5 30 of 4 0.50None
Larval CNS295 454 of 428.02Up
Larval Salivary gland0 00 of 4 0.07Down
Larval midgut1 00 of 4 0.12Down
Larval tubule0 00 of 4 0.00Down
Larval hindgut2 00 of 4 0.26Down
Larval fat body1 00 of 4 0.10Down
Larval trachea2 30 of 4 0.25Down
Larval carcass3 00 of 4 0.30Down
S2 cells (growing)1 10 of 4 0.16Down
Whole fly10 12 of 4

Looking for CG1545-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime