Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15515-RA through 18771 annotations produced 1 hits



(CG15515):

Annotation Number : CG15515
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039719
Gbrowse : chr3R:25731187-25732171 (+) // 100.0 //
Probeset : 1635140_at
Accessions : protein= NP_651746;, nucleotide= NM_143489;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0042302 // structural constituent of cuticle // inf
FlyMine data for FBgn0039719.
BDGP gene expression has embryonic in situ data for CG15515: 4 pix of staining in 1 body parts.
BioGrid reports that CG15515 interacts with CG8505 .
VDRC has 3 RNAi stocks for FBgn0039719 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head14 ± 20 of 4 0.70None
Eye1 ± 00 of 4 0.09Down
Thoracicoabdominal ganglion5 ± 30 of 4 0.30Down
Salivary gland2442 ± 1594 of 4118.98Up
Crop57 ± 34 of 4 2.80Up
Midgut3 ± 10 of 4 0.20Down
Tubule2 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.10Down
Heart7 ± 31 of 4 0.34Down
Fat body4 ± 30 of 4 0.20Down
Ovary2 ± 10 of 4 0.10Down
Testis5 ± 10 of 4 0.20Down
Male accessory glands1 ± 00 of 4 0.10Down
Virgin spermatheca1 ± 00 of 4 0.06Down
Mated spermatheca1 ± 00 of 4 0.07Down
Adult carcass74 ± 134 of 4 3.60Up
Larval CNS1 ± 10 of 4 0.08Down
Larval Salivary gland2 ± 00 of 4 0.14Down
Larval midgut2 ± 00 of 4 0.10Down
Larval tubule2 ± 00 of 4 0.10Down
Larval hindgut128 ± 384 of 4 6.26None
Larval fat body6 ± 20 of 4 0.30Down
Larval trachea75 ± 194 of 4 3.68Up
Larval carcass2230 ± 5484 of 4108.67Up
S2 cells (growing)1 ± 00 of 4 0.06Down
Whole fly20 ± 22 of 4

Looking for CG15515-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime