Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15524-RA through 18771 annotations produced 1 hits



CG15524 (sas-6):

Annotation Number : CG15524
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039731
Gbrowse : chr3R:25821078-25822760 (+) // 100.0 //
Probeset : 1634385_at
Accessions : protein= NP_651756;, nucleotide= NM_143499;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay ///
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039731.
BioGrid reports that CG15524 interacts with CG6607 CG15865 CG4325 CG4887 CG5053 CG8569 CG17450 CG32819 CG32820 .
VDRC has 2 RNAi stocks for FBgn0039731 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain16 ± 04 of 4 0.30Down
Head13 ± 12 of 4 0.30Down
Eye15 ± 23 of 4 0.29Down
Thoracicoabdominal ganglion18 ± 24 of 4 0.40Down
Salivary gland10 ± 40 of 4 0.20Down
Crop17 ± 30 of 4 0.30Down
Midgut7 ± 30 of 4 0.20Down
Tubule7 ± 00 of 4 0.10Down
Hindgut8 ± 31 of 4 0.20Down
Heart6 ± 01 of 4 0.12Down
Fat body7 ± 40 of 4 0.14Down
Ovary144 ± 24 of 4 2.80Up
Testis99 ± 54 of 4 1.90Up
Male accessory glands12 ± 01 of 4 0.20Down
Virgin spermatheca7 ± 20 of 4 0.15Down
Mated spermatheca7 ± 20 of 4 0.15Down
Adult carcass6 ± 20 of 4 0.10Down
Larval CNS69 ± 74 of 4 1.33Up
Larval Salivary gland19 ± 12 of 4 0.37Down
Larval midgut12 ± 31 of 4 0.24Down
Larval tubule13 ± 03 of 4 0.20Down
Larval hindgut17 ± 04 of 4 0.33Down
Larval fat body28 ± 72 of 4 0.50Down
Larval trachea24 ± 34 of 4 0.47Down
Larval carcass16 ± 22 of 4 0.32Down
S2 cells (growing)33 ± 24 of 4 0.64Down
Whole fly52 ± 24 of 4

Looking for CG15524-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime