Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15538-RA through 18771 annotations produced 1 hits



Osiris (Osi23):

Annotation Number : CG15538
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039771
Gbrowse : chr3R:26269870-26271031 (-) // 100.0 //
Probeset : 1633969_at
Accessions : protein= NP_651794;, nucleotide= NM_143537;
FlyMine data for FBgn0039771.
VDRC has 2 RNAi stocks for FBgn0039771 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.70None
Head2 ± 10 of 4 2.20None
Eye0 ± 00 of 4 0.65None
Thoracicoabdominal ganglion0 ± 00 of 4 0.60None
Salivary gland2 ± 00 of 4 1.95None
Crop0 ± 00 of 4 0.70None
Midgut2 ± 10 of 4 2.10None
Tubule1 ± 00 of 4 1.60None
Hindgut0 ± 00 of 4 0.70None
Heart0 ± 00 of 4 0.78None
Fat body2 ± 20 of 4 2.50None
Ovary0 ± 00 of 4 0.60None
Testis2 ± 10 of 4 2.10None
Male accessory glands1 ± 00 of 4 1.30None
Virgin spermatheca1 ± 00 of 4 1.38None
Mated spermatheca1 ± 00 of 4 1.13None
Adult carcass1 ± 00 of 4 1.20None
Larval CNS0 ± 00 of 4 0.68None
Larval Salivary gland1 ± 00 of 4 1.30None
Larval midgut1 ± 00 of 4 1.23None
Larval tubule4 ± 10 of 4 4.00None
Larval hindgut1 ± 00 of 4 1.60None
Larval fat body2 ± 00 of 4 2.00Up
Larval trachea1 ± 20 of 4 1.75None
Larval carcass2 ± 00 of 4 2.25Up
S2 cells (growing)0 ± 00 of 4 0.42Down
Whole fly1 ± 00 of 4

Looking for CG15538-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime