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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15867-RA through 18771 annotations produced 1 hits



CG15867 (CG34398):

Annotation Number : CG15867
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085427
Gbrowse : chr2L:8915834-8916065 (+) // 100.0 //
Probeset : 1628538_at
Accessions : protein= NP_001097127; /// NP_001097128; /// NP_001162914;, nucleotide= NM_001103657; /// NM_001103658; /// NM_001169443;
FlyMine data for FBgn0085427.
VDRC has 7 RNAi stocks for FBgn0085427 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.10Down
Head2 ± 10 of 4 0.40None
Eye3 ± 10 of 4 0.54None
Thoracicoabdominal ganglion2 ± 10 of 4 0.40None
Salivary gland7 ± 30 of 4 1.13None
Crop7 ± 20 of 4 1.20None
Midgut1 ± 00 of 4 0.30Down
Tubule5 ± 00 of 4 0.80None
Hindgut8 ± 00 of 4 1.40None
Heart0 ± 00 of 4 0.15Down
Fat body5 ± 20 of 4 0.80None
Ovary5 ± 00 of 4 0.80None
Testis3 ± 10 of 4 0.60None
Male accessory glands6 ± 20 of 4 1.00None
Virgin spermatheca0 ± 00 of 4 0.13Down
Mated spermatheca2 ± 00 of 4 0.43Down
Adult carcass9 ± 40 of 4 1.60None
Larval CNS3 ± 20 of 4 0.52None
Larval Salivary gland7 ± 20 of 4 1.24None
Larval midgut1 ± 00 of 4 0.24Down
Larval tubule3 ± 10 of 4 0.60None
Larval hindgut3 ± 00 of 4 0.49None
Larval fat body3 ± 10 of 4 0.50None
Larval trachea5 ± 40 of 4 0.83None
Larval carcass8 ± 10 of 4 1.30None
S2 cells (growing)2 ± 00 of 4 0.36Down
Whole fly6 ± 10 of 4

Looking for CG15867-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime