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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15897-RA through 18771 annotations produced 1 hits



CG15897 (wuho):

Annotation Number : CG15897
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029857
Gbrowse : chrX:6182186-6183591 (+) // 100.0 //
Probeset : 1630086_at
Accessions : protein= NP_572307;, nucleotide= NM_132079;
Pathway : 0001673 // male germ cell nucleus // inferred from direct assay /// 0001674 // female germ cell nucleus // inferred from
FlyMine data for FBgn0029857.
VDRC has 4 RNAi stocks for FBgn0029857 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain116 ± 24 of 4 1.40None
Head81 ± 44 of 4 1.00None
Eye99 ± 54 of 4 1.18None
Thoracicoabdominal ganglion89 ± 34 of 4 1.10None
Salivary gland115 ± 94 of 4 1.37Up
Crop102 ± 74 of 4 1.20None
Midgut100 ± 14 of 4 1.20None
Tubule83 ± 54 of 4 1.00None
Hindgut90 ± 34 of 4 1.10None
Heart106 ± 64 of 4 1.26None
Fat body111 ± 124 of 4 1.32Up
Ovary143 ± 34 of 4 1.70Up
Testis35 ± 24 of 4 0.40Down
Male accessory glands106 ± 74 of 4 1.30None
Virgin spermatheca49 ± 44 of 4 0.59Down
Mated spermatheca46 ± 24 of 4 0.56Down
Adult carcass90 ± 74 of 4 1.10None
Larval CNS199 ± 184 of 4 2.37Up
Larval Salivary gland157 ± 34 of 4 1.87Up
Larval midgut96 ± 44 of 4 1.15None
Larval tubule104 ± 24 of 4 1.20Up
Larval hindgut107 ± 54 of 4 1.27Up
Larval fat body84 ± 64 of 4 1.00None
Larval trachea105 ± 94 of 4 1.26Up
Larval carcass77 ± 34 of 4 0.92None
S2 cells (growing)187 ± 04 of 4 2.23Up
Whole fly84 ± 64 of 4

Looking for CG15897-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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