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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG15902-RA through 18771 annotations produced 1 hits



Ugt86Dj (Ugt86Dj):

Annotation Number : CG15902
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040250
Gbrowse : chr3R:6999296-7001117 (-) // 100.0 //
Probeset : 1634029_at
Accessions : protein= NP_652619;, nucleotide= NM_144362;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0040250.
Homophila reports that CG15902 is a close match (2e-40) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 2 RNAi stocks for FBgn0040250 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 0.20Down
Head4 ± 00 of 4 0.20Down
Eye3 ± 00 of 4 0.12Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.20Down
Salivary gland4 ± 20 of 4 0.19Down
Crop5 ± 00 of 4 0.20Down
Midgut287 ± 64 of 411.10Up
Tubule191 ± 134 of 4 7.40Up
Hindgut78 ± 54 of 4 3.00Up
Heart4 ± 11 of 4 0.18Down
Fat body8 ± 21 of 4 0.33Down
Ovary3 ± 00 of 4 0.10Down
Testis4 ± 10 of 4 0.20Down
Male accessory glands11 ± 10 of 4 0.40Down
Virgin spermatheca3 ± 00 of 4 0.12Down
Mated spermatheca6 ± 03 of 4 0.24Down
Adult carcass5 ± 10 of 4 0.20Down
Larval CNS4 ± 10 of 4 0.16Down
Larval Salivary gland3 ± 00 of 4 0.13Down
Larval midgut261 ± 424 of 410.11Up
Larval tubule140 ± 104 of 4 5.40Up
Larval hindgut60 ± 64 of 4 2.35Up
Larval fat body6 ± 10 of 4 0.20Down
Larval trachea4 ± 10 of 4 0.17Down
Larval carcass2 ± 10 of 4 0.10Down
S2 cells (growing)5 ± 00 of 4 0.21Down
Whole fly25 ± 24 of 4

Looking for CG15902-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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