FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1664-RA through 18771 annotations produced 1 hits

locus 1 (sbr):

Annotation Number : CG1664
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003321
Gbrowse : chrX:10726781-10741125 (-) // 100.0 //
Probeset : 1627673_at
Accessions : protein= NP_524660;, nucleotide= NM_079921;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electro
FlyMine data for FBgn0003321.
TRiP has 2 RNAi stocks for FBgn0003321 available for purchase.
VDRC has 4 RNAi stocks for FBgn0003321 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	550 ± 10	4 of 4	2.50	Up
Head	204 ± 6	4 of 4	0.90	None
Eye	264 ± 6	4 of 4	1.18	None
Thoracicoabdominal ganglion	444 ± 16	4 of 4	2.00	Up
Salivary gland	211 ± 1	4 of 4	0.94	None
Crop	225 ± 6	4 of 4	1.00	None
Midgut	197 ± 2	4 of 4	0.90	None
Tubule	206 ± 6	4 of 4	0.90	Down
Hindgut	185 ± 2	4 of 4	0.80	None
Heart	197 ± 8	4 of 4	0.88	None
Fat body	207 ± 9	4 of 4	0.93	None
Ovary	414 ± 13	4 of 4	1.90	Up
Testis	43 ± 0	4 of 4	0.20	Down
Male accessory glands	229 ± 7	4 of 4	1.00	None
Virgin spermatheca	187 ± 6	4 of 4	0.84	None
Mated spermatheca	194 ± 5	4 of 4	0.87	None
Adult carcass	173 ± 1	4 of 4	0.80	None
Larval CNS	321 ± 14	4 of 4	1.44	Up
Larval Salivary gland	224 ± 3	4 of 4	1.00	None
Larval midgut	140 ± 7	4 of 4	0.63	Down
Larval tubule	225 ± 6	4 of 4	1.00	None
Larval hindgut	194 ± 5	4 of 4	0.87	None
Larval fat body	206 ± 10	4 of 4	0.90	None
Larval trachea	287 ± 20	4 of 4	1.28	Up
Larval carcass	188 ± 11	4 of 4	0.84	None
S2 cells (growing)	571 ± 3	4 of 4	2.56	Up
Whole fly	223 ± 18	4 of 4

Looking for CG1664-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720