FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG16707-RA through 18771 annotations produced 1 hits

visgun (vsg):

Annotation Number : CG16707
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045823
Gbrowse : chr3L:9707419-9710816 (+) // 100.0 //
Probeset : 1641347_s_at
Accessions : protein= NP_648349; /// NP_729534; /// NP_729535; /// NP_729536;, nucleotide= NM_140092; /// NM_168362; /// NM_168363; /// NM_168364;
Pathway : 0031410 // cytoplasmic vesicle // inferred from direct assay
FlyMine data for FBgn0045823.
BDGP gene expression has embryonic in situ data for BEST:GH15083: 18 pix of staining in 6 body parts.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1408 ± 25	4 of 4	1.50	Up
Head	1708 ± 33	4 of 4	1.80	Up
Eye	2496 ± 46	4 of 4	2.65	Up
Thoracicoabdominal ganglion	1884 ± 47	4 of 4	2.00	Up
Salivary gland	2381 ± 12	4 of 4	2.53	Up
Crop	2493 ± 78	4 of 4	2.60	Up
Midgut	900 ± 15	4 of 4	1.00	None
Tubule	2701 ± 108	4 of 4	2.90	Up
Hindgut	1642 ± 11	4 of 4	1.70	Up
Heart	2571 ± 108	4 of 4	2.73	Up
Fat body	1774 ± 135	4 of 4	1.89	Up
Ovary	719 ± 11	4 of 4	0.80	Down
Testis	382 ± 13	4 of 4	0.40	Down
Male accessory glands	3122 ± 125	4 of 4	3.30	Up
Virgin spermatheca	1579 ± 24	4 of 4	1.68	Up
Mated spermatheca	1533 ± 23	4 of 4	1.63	Up
Adult carcass	1723 ± 37	4 of 4	1.80	Up
Larval CNS	1077 ± 46	4 of 4	1.14	Up
Larval Salivary gland	1582 ± 34	4 of 4	1.68	Up
Larval midgut	975 ± 62	4 of 4	1.04	None
Larval tubule	2622 ± 78	4 of 4	2.80	Up
Larval hindgut	1521 ± 32	4 of 4	1.62	Up
Larval fat body	2350 ± 231	4 of 4	2.50	Up
Larval trachea	2319 ± 205	4 of 4	2.46	Up
Larval carcass	1700 ± 30	4 of 4	1.81	Up
S2 cells (growing)	3126 ± 56	4 of 4	3.32	Up
Whole fly	941 ± 22	4 of 4

Looking for CG16707-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720