FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG16728-RA through 18771 annotations produced 1 hits

CG16728 (Git):

Annotation Number : CG16728
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033539
Gbrowse : chr2R:6529322-6532921 (-) // 99.84 //
Probeset : 1641554_at
Accessions : protein= NP_610599;, nucleotide= NM_136755;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0031252 // cell leading edge // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferre
FlyMine data for FBgn0033539.
BioGrid reports that CG16728 interacts with CG7611 CG1676 CG16788 CG17383 CG18608 CG18766 CG2830 CG3214 CG3294 CG3320 CG3929 CG4533 CG4617 CG5180 CG5393 CG6181 CG6801 CG7757 CG7803 CG8014 CG8449 CG8548 CG9252 CG9373 CG9771 .
TRiP has 1 RNAi stocks for FBgn0033539 available for purchase.
VDRC has 1 RNAi stocks for FBgn0033539 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	57 ± 2	4 of 4	0.40	Down
Head	102 ± 6	4 of 4	0.70	Down
Eye	85 ± 3	4 of 4	0.60	Down
Thoracicoabdominal ganglion	66 ± 2	4 of 4	0.50	Down
Salivary gland	100 ± 6	4 of 4	0.70	Down
Crop	148 ± 4	4 of 4	1.00	None
Midgut	128 ± 5	4 of 4	0.90	None
Tubule	60 ± 1	4 of 4	0.40	Down
Hindgut	103 ± 3	4 of 4	0.70	Down
Heart	58 ± 3	4 of 4	0.41	Down
Fat body	62 ± 13	4 of 4	0.43	Down
Ovary	407 ± 16	4 of 4	2.80	Up
Testis	63 ± 2	4 of 4	0.40	Down
Male accessory glands	93 ± 4	4 of 4	0.70	Down
Virgin spermatheca	73 ± 2	4 of 4	0.51	Down
Mated spermatheca	92 ± 9	4 of 4	0.65	Down
Adult carcass	90 ± 8	4 of 4	0.60	Down
Larval CNS	186 ± 5	4 of 4	1.30	Up
Larval Salivary gland	140 ± 3	0 of 4	0.97	None
Larval midgut	143 ± 4	4 of 4	0.99	None
Larval tubule	144 ± 4	4 of 4	1.00	None
Larval hindgut	134 ± 3	4 of 4	0.93	None
Larval fat body	86 ± 4	4 of 4	0.60	Down
Larval trachea	109 ± 10	4 of 4	0.76	Down
Larval carcass	172 ± 5	4 of 4	1.20	Up
S2 cells (growing)	297 ± 8	4 of 4	2.06	Up
Whole fly	143 ± 7	4 of 4

Looking for CG16728-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720