FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG16747-RA through 18771 annotations produced 1 hits

Ornithine decarboxylase antizyme (Oda):

Annotation Number : CG16747
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014184
Gbrowse : chr2R:8054080-8061767 (-) // 99.77 //
Probeset : 1634757_a_at
Accessions : protein= NP_725103; /// NP_725104; /// NP_725105;, nucleotide= NM_165863; /// NM_165864; /// NM_165865;
Interpro : 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0014184.
BDGP gene expression has embryonic in situ data for guf: 4 pix of staining in 2 body parts.
BioGrid reports that CG16747 interacts with CG2227 CG4820 CG7386 CG17050 CG17273 CG18217 CG2125 CG2835 CG2944 CG30387 CG30389 CG31550 CG31917 CG32594 CG4617 CG4753 CG5546 CG5874 CG5928 CG6058 CG6407 CG6606 CG7001 CG7171 CG7546 CG7570 CG7974 CG7987 CG8319 CG8368 CG9072 CG9324 CG9471 Dmel CG18350 Dmel CG14425 Dmel CG34380 .
TRiP has 1 RNAi stocks for FBgn0014184 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2082 ± 120	4 of 4	1.10	None
Head	2456 ± 111	4 of 4	1.30	Up
Eye	3871 ± 89	4 of 4	2.01	Up
Thoracicoabdominal ganglion	2756 ± 48	4 of 4	1.40	Up
Salivary gland	5195 ± 331	4 of 4	2.70	Up
Crop	3159 ± 109	4 of 4	1.60	Up
Midgut	2956 ± 130	4 of 4	1.50	Up
Tubule	4261 ± 191	4 of 4	2.20	Up
Hindgut	2820 ± 73	4 of 4	1.50	Up
Heart	2519 ± 60	4 of 4	1.31	Up
Fat body	3217 ± 167	4 of 4	1.67	Up
Ovary	1519 ± 26	4 of 4	0.80	None
Testis	518 ± 29	4 of 4	0.30	Down
Male accessory glands	4216 ± 81	4 of 4	2.20	Up
Virgin spermatheca	3735 ± 119	4 of 4	1.94	Up
Mated spermatheca	3431 ± 160	4 of 4	1.78	Up
Adult carcass	2997 ± 66	4 of 4	1.60	Up
Larval CNS	2032 ± 78	4 of 4	1.06	None
Larval Salivary gland	2554 ± 272	4 of 4	1.33	None
Larval midgut	4702 ± 112	4 of 4	2.44	Up
Larval tubule	3328 ± 157	4 of 4	1.70	Up
Larval hindgut	3403 ± 72	4 of 4	1.77	Up
Larval fat body	2373 ± 158	4 of 4	1.20	None
Larval trachea	2130 ± 206	4 of 4	1.11	None
Larval carcass	2741 ± 89	4 of 4	1.42	Up
S2 cells (growing)	838 ± 18	4 of 4	0.44	Down
Whole fly	1924 ± 150	4 of 4

Looking for CG16747-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720