FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG16752-RA through 18771 annotations produced 2 hits

sex peptide receptor (SPR):

Annotation Number : S.CX000568
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029768
Gbrowse : chrX:5330684-5360574 (+) // 100.0 //
Probeset : 1634888_at
Accessions : protein= NP_572225;, nucleotide= NM_131997;
Pathway : post-mating // inferred from mutant phenotype /// 0048042 // regulation of post-mating oviposition // inferred from mut
Interpro : 0005886 // plasma membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic
FlyMine data for FBgn0029768.
BDGP gene expression has embryonic in situ data for CG16752: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0029768 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	1 of 4	1.20	None
Head	2 ± 1	0 of 4	0.80	None
Eye	3 ± 1	0 of 4	1.20	None
Thoracicoabdominal ganglion	8 ± 1	3 of 4	2.70	Up
Salivary gland	5 ± 2	0 of 4	1.77	None
Crop	2 ± 1	0 of 4	0.70	None
Midgut	3 ± 0	0 of 4	1.20	None
Tubule	5 ± 0	1 of 4	1.80	Up
Hindgut	6 ± 0	2 of 4	1.90	Up
Heart	0 ± 0	0 of 4	0.20	Down
Fat body	6 ± 2	2 of 4	2.07	None
Ovary	1 ± 0	0 of 4	0.40	None
Testis	1 ± 0	0 of 4	0.60	None
Male accessory glands	7 ± 2	1 of 4	2.40	None
Virgin spermatheca	27 ± 2	4 of 4	8.55	Up
Mated spermatheca	35 ± 7	4 of 4	10.93	Up
Adult carcass	3 ± 1	0 of 4	1.00	None
Larval CNS	4 ± 1	2 of 4	1.38	None
Larval Salivary gland	3 ± 0	0 of 4	1.21	None
Larval midgut	5 ± 1	1 of 4	1.83	None
Larval tubule	2 ± 0	0 of 4	0.60	None
Larval hindgut	2 ± 1	0 of 4	0.84	None
Larval fat body	4 ± 1	0 of 4	1.40	None
Larval trachea	2 ± 1	0 of 4	0.77	None
Larval carcass	2 ± 0	0 of 4	0.92	None
S2 cells (growing)	0 ± 0	0 of 4	0.18	Down
Whole fly	3 ± 0	1 of 4

sex peptide receptor (SPR):

Annotation Number : CG16752
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029768
Gbrowse : chrX:5340693-5387581 (+) // 99.71 //
Probeset : 1623478_at
Accessions : protein= NP_572225;, nucleotide= NM_131997;
Pathway : post-mating // inferred from mutant phenotype /// 0048042 // regulation of post-mating oviposition // inferred from mut
Interpro : 0005886 // plasma membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic
FlyMine data for FBgn0029768.
BDGP gene expression has embryonic in situ data for CG16752: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0029768 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	478 ± 13	4 of 4	5.40	Up
Head	183 ± 25	4 of 4	2.10	Up
Eye	35 ± 2	4 of 4	0.40	Down
Thoracicoabdominal ganglion	1033 ± 35	4 of 4	11.70	Up
Salivary gland	11 ± 2	2 of 4	0.13	Down
Crop	7 ± 2	3 of 4	0.10	Down
Midgut	4 ± 1	1 of 4	0.10	Down
Tubule	143 ± 53	4 of 4	1.60	None
Hindgut	30 ± 5	4 of 4	0.30	Down
Heart	15 ± 0	4 of 4	0.17	Down
Fat body	33 ± 9	4 of 4	0.38	Down
Ovary	8 ± 0	4 of 4	0.10	Down
Testis	1 ± 1	0 of 4	0.00	Down
Male accessory glands	11 ± 3	3 of 4	0.10	Down
Virgin spermatheca	1682 ± 145	4 of 4	19.04	Up
Mated spermatheca	1724 ± 267	4 of 4	19.51	Up
Adult carcass	70 ± 4	4 of 4	0.80	None
Larval CNS	70 ± 4	4 of 4	0.80	None
Larval Salivary gland	7 ± 0	1 of 4	0.08	Down
Larval midgut	20 ± 1	4 of 4	0.23	Down
Larval tubule	3 ± 0	0 of 4	0.00	Down
Larval hindgut	24 ± 0	4 of 4	0.27	Down
Larval fat body	6 ± 2	1 of 4	0.10	Down
Larval trachea	4 ± 2	2 of 4	0.05	Down
Larval carcass	5 ± 0	2 of 4	0.07	Down
S2 cells (growing)	4 ± 0	2 of 4	0.05	Down
Whole fly	88 ± 5	4 of 4

Looking for CG16752-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720