Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG16892-RA through 18771 annotations produced 1 hits



(CG16892):

Annotation Number : CG16892
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030122
Gbrowse : chrX:9167449-9169387 (+) // 100.0 //
Probeset : 1637911_at
Accessions : protein= NP_572557;, nucleotide= NM_132329;
FlyMine data for FBgn0030122.
Homophila reports that CG16892 is a close match (6e-45) to human gene AAA;AAAS (NP_056480), a gene associated with Achalasia-addisonianism-alacrimia syndrome, 231550 (3).
VDRC has 2 RNAi stocks for FBgn0030122 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain47 ± 14 of 4 0.40Down
Head28 ± 34 of 4 0.20Down
Eye21 ± 24 of 4 0.16Down
Thoracicoabdominal ganglion50 ± 24 of 4 0.40Down
Salivary gland21 ± 20 of 4 0.16Down
Crop33 ± 14 of 4 0.30Down
Midgut28 ± 14 of 4 0.20Down
Tubule20 ± 12 of 4 0.20Down
Hindgut34 ± 04 of 4 0.30Down
Heart29 ± 24 of 4 0.22Down
Fat body39 ± 54 of 4 0.30Down
Ovary243 ± 94 of 4 1.90Up
Testis42 ± 24 of 4 0.30Down
Male accessory glands71 ± 44 of 4 0.50Down
Virgin spermatheca35 ± 34 of 4 0.27Down
Mated spermatheca32 ± 04 of 4 0.24Down
Adult carcass33 ± 13 of 4 0.30Down
Larval CNS133 ± 104 of 4 1.02None
Larval Salivary gland68 ± 54 of 4 0.52Down
Larval midgut41 ± 14 of 4 0.32Down
Larval tubule90 ± 24 of 4 0.70Down
Larval hindgut67 ± 44 of 4 0.51Down
Larval fat body78 ± 64 of 4 0.60Down
Larval trachea86 ± 64 of 4 0.66Down
Larval carcass81 ± 54 of 4 0.62Down
S2 cells (growing)112 ± 44 of 4 0.86None
Whole fly131 ± 94 of 4

Looking for CG16892-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime