FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG16944-RA through 18771 annotations produced 1 hits

lethal(1)9Ed (sesB):

Annotation Number : CG16944
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003360
Gbrowse : chrX:10675018-10680978 (-) // 100.0 //
Probeset : 1630941_s_at
Accessions : protein= NP_511109; /// NP_727448; /// NP_727449; /// NP_727450;, nucleotide= NM_078554; /// NM_167246; /// NM_167247; /// NM_167248;
Pathway : engulfment // inferred from mutant phenotype /// 0007268 // synaptic transmission // inferred from direct assay /// 000
Interpro : 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from s
FlyMine data for FBgn0003360.
BDGP gene expression has embryonic in situ data for sesB: 4 pix of staining in 1 body parts.
Homophila reports that CG16944 is a close match (7e-11) to human gene SLC25A20;CACT;CAC (NP_000378), a gene associated with Carnitine-acylcarnitine translocase deficiency (3).
BioGrid reports that CG16944 interacts with CG16884 CG17158 CG18217 CG18476 CG31482 CG4463 .
TRiP has 3 RNAi stocks for FBgn0003360 available for purchase.
VDRC has 5 RNAi stocks for FBgn0003360 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4088 ± 85	4 of 4	1.00	None
Head	4886 ± 180	4 of 4	1.20	None
Eye	6243 ± 86	4 of 4	1.48	Up
Thoracicoabdominal ganglion	5600 ± 177	4 of 4	1.30	Up
Salivary gland	9963 ± 447	4 of 4	2.37	Up
Crop	5047 ± 293	4 of 4	1.20	None
Midgut	3381 ± 87	4 of 4	0.80	Down
Tubule	5904 ± 186	4 of 4	1.40	Up
Hindgut	5264 ± 120	4 of 4	1.30	Up
Heart	5486 ± 298	4 of 4	1.30	Up
Fat body	5945 ± 874	4 of 4	1.41	Up
Ovary	2743 ± 6	4 of 4	0.70	Down
Testis	467 ± 20	4 of 4	0.10	Down
Male accessory glands	3570 ± 89	4 of 4	0.80	None
Virgin spermatheca	5595 ± 137	4 of 4	1.33	Up
Mated spermatheca	5280 ± 285	4 of 4	1.25	Up
Adult carcass	7528 ± 487	4 of 4	1.80	Up
Larval CNS	2869 ± 120	4 of 4	0.68	Down
Larval Salivary gland	4445 ± 152	4 of 4	1.06	None
Larval midgut	5345 ± 238	4 of 4	1.27	Up
Larval tubule	2502 ± 300	4 of 4	0.60	Down
Larval hindgut	5279 ± 66	4 of 4	1.25	Up
Larval fat body	1313 ± 182	4 of 4	0.30	Down
Larval trachea	3440 ± 99	4 of 4	0.82	None
Larval carcass	5615 ± 506	4 of 4	1.33	None
S2 cells (growing)	2282 ± 8	4 of 4	0.54	Down
Whole fly	4210 ± 254	4 of 4

Looking for CG16944-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720