FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG16983-RA through 18771 annotations produced 1 hits

skpA (skpA):

Annotation Number : CG16983
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025637
Gbrowse : chrX:550104-551937 (+) // 100.0 //
Probeset : 1625801_s_at
Accessions : protein= NP_001033818; /// NP_477390; /// NP_726690; /// NP_726691; /// NP_726692; /// NP_726693; /// NP_726694; /// NP_726695;, nucleotide= NM_001038729; /// NM_058042; /// NM_166856; /// NM_166857; /// NM_166858; /// NM_166859; /// NM_166860; /// NM_166861;
Pathway : 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0005875 //
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0025637.
BDGP gene expression has embryonic in situ data for skpA: 8 pix of staining in 1 body parts.
BioGrid reports that CG16983 interacts with CG2247 CG4643 CG9316 CG9660 CG9772 CG9952 CG3412 CG4911 CG5327 CG7148 CG32042 CG1871 CG4643 CG10855 CG3640 CG10805 CG18745 CG11963 CG9882 CG14937 CG14317 CG1034 CG4911 CG7148 CG31646 CG9772 CG18273 CG2010 CG3412 CG9952 CG9316 CG9984 CG12432 CG8272 CG13213 CG4221 CG11486 CG3193 CG33553 CG6758 CG5003 CG4496 CG1244 CG9461 CG15010 CG7922 CG13085 CG10395 .
TRiP has 3 RNAi stocks for FBgn0025637 available for purchase.
VDRC has 5 RNAi stocks for FBgn0025637 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1266 ± 22	4 of 4	1.20	None
Head	1040 ± 65	4 of 4	1.00	None
Eye	1803 ± 50	4 of 4	1.71	Up
Thoracicoabdominal ganglion	1212 ± 24	4 of 4	1.10	None
Salivary gland	1407 ± 47	4 of 4	1.33	Up
Crop	1517 ± 41	4 of 4	1.40	Up
Midgut	1193 ± 27	4 of 4	1.10	None
Tubule	1618 ± 96	4 of 4	1.50	Up
Hindgut	1454 ± 15	4 of 4	1.40	Up
Heart	1292 ± 21	4 of 4	1.22	None
Fat body	1257 ± 66	4 of 4	1.19	None
Ovary	1273 ± 22	4 of 4	1.20	None
Testis	207 ± 4	4 of 4	0.20	Down
Male accessory glands	1022 ± 15	4 of 4	1.00	None
Virgin spermatheca	1144 ± 1	4 of 4	1.08	None
Mated spermatheca	1068 ± 40	4 of 4	1.01	None
Adult carcass	829 ± 29	4 of 4	0.80	None
Larval CNS	1603 ± 112	4 of 4	1.52	Up
Larval Salivary gland	1966 ± 34	4 of 4	1.86	Up
Larval midgut	1358 ± 34	4 of 4	1.29	Up
Larval tubule	1717 ± 15	4 of 4	1.60	Up
Larval hindgut	1636 ± 57	4 of 4	1.55	Up
Larval fat body	1132 ± 123	4 of 4	1.10	None
Larval trachea	1627 ± 83	4 of 4	1.54	Up
Larval carcass	1522 ± 20	4 of 4	1.44	Up
S2 cells (growing)	1852 ± 11	4 of 4	1.75	Up
Whole fly	1057 ± 81	4 of 4

Looking for CG16983-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720