FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG16987-RB through 18771 annotations produced 1 hits

dActivin2 (daw):

Annotation Number : CG16987
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031461
Gbrowse : chr2L:2805517-2812147 (+) // 100.0 //
Probeset : 1626766_s_at
Accessions : protein= NP_523461; /// NP_722840;, nucleotide= NM_078737; /// NM_164503;
Interpro : 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 00055
FlyMine data for FBgn0031461.
BDGP gene expression has embryonic in situ data for Alp23B: 25 pix of staining in 9 body parts.
Homophila reports that CG16987 is a close match (3e-11) to human gene TGFB3 (NP_003230), a gene associated with Arrhythmogenic right ventricular dysplasia 1, 107970 (3).
BioGrid reports that CG16987 interacts with CG7538 CG3838 CG18412 .
TRiP has 1 RNAi stocks for FBgn0031461 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031461 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	40 ± 4	4 of 4	0.30	Down
Head	296 ± 13	4 of 4	2.30	Up
Eye	135 ± 17	4 of 4	1.04	None
Thoracicoabdominal ganglion	43 ± 2	4 of 4	0.30	Down
Salivary gland	6 ± 2	0 of 4	0.05	Down
Crop	13 ± 1	2 of 4	0.10	Down
Midgut	110 ± 13	4 of 4	0.90	None
Tubule	14 ± 3	1 of 4	0.10	Down
Hindgut	93 ± 6	4 of 4	0.70	None
Heart	331 ± 6	4 of 4	2.55	Up
Fat body	715 ± 50	4 of 4	5.50	Up
Ovary	31 ± 5	4 of 4	0.20	Down
Testis	5 ± 1	1 of 4	0.00	Down
Male accessory glands	9 ± 2	1 of 4	0.10	Down
Virgin spermatheca	187 ± 13	4 of 4	1.44	Up
Mated spermatheca	510 ± 24	4 of 4	3.92	Up
Adult carcass	325 ± 19	4 of 4	2.50	Up
Larval CNS	100 ± 20	4 of 4	0.78	None
Larval Salivary gland	30 ± 6	4 of 4	0.24	Down
Larval midgut	213 ± 26	4 of 4	1.64	Up
Larval tubule	12 ± 1	0 of 4	0.10	Down
Larval hindgut	288 ± 23	4 of 4	2.22	Up
Larval fat body	1500 ± 68	4 of 4	11.50	Up
Larval trachea	90 ± 18	4 of 4	0.70	None
Larval carcass	231 ± 17	4 of 4	1.78	Up
S2 cells (growing)	86 ± 4	4 of 4	0.67	None
Whole fly	130 ± 17	4 of 4

Looking for CG16987-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720