FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG17046-RA through 18771 annotations produced 1 hits

klarsicht (klar):

Annotation Number : CG17046
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001316
Gbrowse : chr3L:434257-540589 (-) // 100.0 //
Probeset : 1628155_at
Accessions : protein= NP_001036576; /// NP_001097462; /// NP_001097463; /// NP_523873;, nucleotide= NM_001043111; /// NM_001103992; /// NM_001103993; /// NM_079149;
Pathway : open tracheal system // inferred from mutant phenotype /// 0035239 // tube morphogenesis // inferred from mutant phenot
Interpro : 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 000
FlyMine data for FBgn0001316.
BioGrid reports that CG17046 interacts with CG9669 CG32158 CG5466 CG18816 CG30160 CG9768 CG9057 .
TRiP has 2 RNAi stocks for FBgn0001316 available for purchase.
VDRC has 1 RNAi stocks for FBgn0001316 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	262 ± 6	4 of 4	1.40	Up
Head	188 ± 10	4 of 4	1.00	None
Eye	307 ± 27	4 of 4	1.66	Up
Thoracicoabdominal ganglion	269 ± 5	4 of 4	1.50	Up
Salivary gland	149 ± 8	4 of 4	0.81	Down
Crop	274 ± 8	4 of 4	1.50	Up
Midgut	384 ± 10	4 of 4	2.10	Up
Tubule	205 ± 8	4 of 4	1.10	Up
Hindgut	341 ± 10	4 of 4	1.80	Up
Heart	251 ± 20	4 of 4	1.36	Up
Fat body	176 ± 17	4 of 4	0.95	None
Ovary	232 ± 12	4 of 4	1.30	Up
Testis	99 ± 7	4 of 4	0.50	Down
Male accessory glands	151 ± 4	4 of 4	0.80	Down
Virgin spermatheca	253 ± 18	4 of 4	1.37	Up
Mated spermatheca	271 ± 18	4 of 4	1.47	Up
Adult carcass	217 ± 8	4 of 4	1.20	Up
Larval CNS	649 ± 87	4 of 4	3.51	Up
Larval Salivary gland	200 ± 26	4 of 4	1.08	None
Larval midgut	372 ± 7	4 of 4	2.02	Up
Larval tubule	209 ± 6	4 of 4	1.10	None
Larval hindgut	352 ± 17	4 of 4	1.91	Up
Larval fat body	139 ± 7	4 of 4	0.80	Down
Larval trachea	477 ± 37	4 of 4	2.58	Up
Larval carcass	309 ± 9	4 of 4	1.67	Up
S2 cells (growing)	412 ± 12	4 of 4	2.23	Up
Whole fly	185 ± 8	4 of 4

Looking for CG17046-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720