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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG17124-RA through 18771 annotations produced 1 hits



(CG17124):

Annotation Number : CG17124
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032297
Gbrowse : chr2L:10745114-10756316 (-) // 100.0 //
Probeset : 1633795_a_at
Accessions : protein= NP_609450; /// NP_723615;, nucleotide= NM_135606; /// NM_164942;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0004864 // phosphoprotein phosphatase inhibitor activity // non-traceable author statement /// 0005515 // protein bindin
FlyMine data for FBgn0032297.
BDGP gene expression has embryonic in situ data for CG17124: 29 pix of staining in 14 body parts.
BioGrid reports that CG17124 interacts with CG8642 .
VDRC has 1 RNAi stocks for FBgn0032297 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain273 ± 114 of 4 0.90None
Head939 ± 494 of 4 3.20Up
Eye601 ± 324 of 4 2.07Up
Thoracicoabdominal ganglion169 ± 34 of 4 0.60Down
Salivary gland96 ± 54 of 4 0.33Down
Crop583 ± 264 of 4 2.00Up
Midgut62 ± 14 of 4 0.20Down
Tubule122 ± 74 of 4 0.40Down
Hindgut382 ± 144 of 4 1.30Up
Heart1180 ± 534 of 4 4.06Up
Fat body2235 ± 2474 of 4 7.68Up
Ovary45 ± 54 of 4 0.20Down
Testis146 ± 44 of 4 0.50Down
Male accessory glands44 ± 64 of 4 0.20Down
Virgin spermatheca1644 ± 864 of 4 5.65Up
Mated spermatheca1623 ± 724 of 4 5.58Up
Adult carcass933 ± 504 of 4 3.20Up
Larval CNS204 ± 234 of 4 0.70Down
Larval Salivary gland68 ± 84 of 4 0.23Down
Larval midgut137 ± 74 of 4 0.47Down
Larval tubule132 ± 54 of 4 0.50Down
Larval hindgut466 ± 214 of 4 1.60Up
Larval fat body402 ± 304 of 4 1.40Up
Larval trachea420 ± 444 of 4 1.44Up
Larval carcass213 ± 214 of 4 0.73None
S2 cells (growing)7 ± 10 of 4 0.03Down
Whole fly291 ± 254 of 4

Looking for CG17124-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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