FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG17227-RA through 18771 annotations produced 1 hits

DNA ligase III (lig3):

Annotation Number : CG17227
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038035
Gbrowse : chr3R:8224735-8227394 (-) // 100.0 //
Probeset : 1636131_at
Accessions : protein= NP_650187;, nucleotide= NM_141930;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electro
FlyMine data for FBgn0038035.
BDGP gene expression has embryonic in situ data for Cyp9f3Psi: 15 pix of staining in 4 body parts.
Homophila reports that CG17227 is a close match (3e-37) to human gene LIG4 (NP_996820), a gene associated with LIG4 syndrome, 606593 (3);{Multiple myeloma, resistance to}, 254500 (3).
VDRC has 2 RNAi stocks for FBgn0038035 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	87 ± 1	4 of 4	1.50	Up
Head	69 ± 5	4 of 4	1.20	None
Eye	62 ± 1	4 of 4	1.05	None
Thoracicoabdominal ganglion	113 ± 8	4 of 4	1.90	Up
Salivary gland	84 ± 3	4 of 4	1.42	Up
Crop	124 ± 6	4 of 4	2.10	Up
Midgut	53 ± 0	4 of 4	0.90	None
Tubule	123 ± 13	4 of 4	2.10	Up
Hindgut	95 ± 5	4 of 4	1.60	Up
Heart	63 ± 1	4 of 4	1.07	None
Fat body	114 ± 7	4 of 4	1.92	Up
Ovary	82 ± 3	4 of 4	1.40	Up
Testis	25 ± 0	4 of 4	0.40	Down
Male accessory glands	166 ± 6	4 of 4	2.80	Up
Virgin spermatheca	71 ± 2	4 of 4	1.19	None
Mated spermatheca	90 ± 6	4 of 4	1.52	Up
Adult carcass	76 ± 2	4 of 4	1.30	Up
Larval CNS	103 ± 5	4 of 4	1.74	Up
Larval Salivary gland	114 ± 7	4 of 4	1.92	Up
Larval midgut	83 ± 1	4 of 4	1.41	Up
Larval tubule	127 ± 5	4 of 4	2.10	Up
Larval hindgut	121 ± 2	4 of 4	2.03	Up
Larval fat body	148 ± 12	4 of 4	2.50	Up
Larval trachea	93 ± 12	4 of 4	1.56	Up
Larval carcass	94 ± 1	4 of 4	1.58	Up
S2 cells (growing)	149 ± 3	4 of 4	2.52	Up
Whole fly	59 ± 4	4 of 4

Looking for CG17227-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720