FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1725-RD through 18771 annotations produced 2 hits

Discslarge (dlg1):

Annotation Number : CG1725
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001624
Gbrowse : chrX:11283726-11301780 (+) // 100.0 //
Probeset : 1624021_a_at
Accessions : protein= NP_001096955; /// NP_001096956; /// NP_001162718; /// NP_001162719; /// NP_001162720; /// NP_511120; /// NP_727518; /// NP_727519; /// NP_727520; /// NP_996402; /// NP_996403; /// NP_996404; /// NP_996405; /// NP_996406; /// NP_996407;, nucleotide= NM_001103485; /// NM_001103486; /// NM_001169247; /// NM_001169248; /// NM_001169249; /// NM_078565; /// NM_167280; /// NM_167281; /// NM_167282; /// NM_206679; /// NM_206680; /// NM_206681; /// NM_206682; /// NM_206683; /// NM_206684;
Pathway : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /
Interpro : 0004385 // guanylate kinase activity // traceable author statement /// 0004871 // signal transducer activity // inferred
FlyMine data for FBgn0001624.
Homophila reports that CG1725 is a close match (1e-13) to human gene TJP2;ZO2 (NP_004808), a gene associated with Hypercholanemia, familial, 607748 (3).
BioGrid reports that CG1725 interacts with CG5410 CG17666 CG17826 CG30387 CG4761 CG8301 CG9572 CG9665 CG9986 CG11579 CG5055 CG6383 CG6383 CG12348 CG5462 .
TRiP has 11 RNAi stocks for FBgn0001624 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001624 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	367 ± 7	4 of 4	3.30	Up
Head	120 ± 16	4 of 4	1.10	None
Eye	246 ± 13	4 of 4	2.24	Up
Thoracicoabdominal ganglion	214 ± 24	4 of 4	2.00	Up
Salivary gland	107 ± 6	4 of 4	0.97	None
Crop	330 ± 13	4 of 4	3.00	Up
Midgut	57 ± 4	4 of 4	0.50	Down
Tubule	69 ± 2	4 of 4	0.60	Down
Hindgut	296 ± 9	4 of 4	2.70	Up
Heart	334 ± 11	4 of 4	3.04	Up
Fat body	118 ± 13	4 of 4	1.08	None
Ovary	221 ± 7	4 of 4	2.00	Up
Testis	42 ± 2	4 of 4	0.40	Down
Male accessory glands	114 ± 5	4 of 4	1.00	None
Virgin spermatheca	63 ± 4	4 of 4	0.58	Down
Mated spermatheca	71 ± 5	4 of 4	0.65	Down
Adult carcass	173 ± 11	4 of 4	1.60	Up
Larval CNS	202 ± 19	4 of 4	1.84	Up
Larval Salivary gland	123 ± 7	4 of 4	1.13	None
Larval midgut	40 ± 2	4 of 4	0.36	Down
Larval tubule	81 ± 2	4 of 4	0.70	Down
Larval hindgut	153 ± 13	4 of 4	1.39	Up
Larval fat body	82 ± 10	4 of 4	0.70	None
Larval trachea	225 ± 12	4 of 4	2.05	Up
Larval carcass	246 ± 17	4 of 4	2.24	Up
S2 cells (growing)	192 ± 6	4 of 4	1.75	Up
Whole fly	110 ± 4	4 of 4

Discslarge (dlg1):

Annotation Number : CG1725
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001624
Gbrowse : chrX:11269795-11296894 (+) // 99.3 //
Probeset : 1640119_a_at
Accessions : protein= NP_001096955; /// NP_001096956; /// NP_001162718; /// NP_001162719; /// NP_001162720; /// NP_511120; /// NP_727518; /// NP_727519; /// NP_727520; /// NP_996402; /// NP_996403; /// NP_996404; /// NP_996405; /// NP_996406; /// NP_996407;, nucleotide= NM_001103485; /// NM_001103486; /// NM_001169247; /// NM_001169248; /// NM_001169249; /// NM_078565; /// NM_167280; /// NM_167281; /// NM_167282; /// NM_206679; /// NM_206680; /// NM_206681; /// NM_206682; /// NM_206683; /// NM_206684;
Pathway : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /
Interpro : 0004385 // guanylate kinase activity // traceable author statement /// 0004871 // signal transducer activity // inferred
FlyMine data for FBgn0001624.
Homophila reports that CG1725 is a close match (1e-13) to human gene TJP2;ZO2 (NP_004808), a gene associated with Hypercholanemia, familial, 607748 (3).
BioGrid reports that CG1725 interacts with CG5410 CG17666 CG17826 CG30387 CG4761 CG8301 CG9572 CG9665 CG9986 CG11579 CG5055 CG6383 CG6383 CG12348 CG5462 .
TRiP has 11 RNAi stocks for FBgn0001624 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001624 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	36 ± 4	4 of 4	1.20	None
Head	198 ± 15	4 of 4	6.30	Up
Eye	925 ± 81	4 of 4	29.65	Up
Thoracicoabdominal ganglion	12 ± 2	2 of 4	0.40	Down
Salivary gland	18 ± 2	1 of 4	0.58	Down
Crop	16 ± 2	0 of 4	0.50	Down
Midgut	7 ± 0	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	10 ± 1	1 of 4	0.30	Down
Heart	9 ± 3	1 of 4	0.30	Down
Fat body	8 ± 2	0 of 4	0.26	Down
Ovary	8 ± 0	1 of 4	0.30	Down
Testis	2 ± 0	0 of 4	0.10	Down
Male accessory glands	12 ± 1	2 of 4	0.40	Down
Virgin spermatheca	3 ± 1	0 of 4	0.10	Down
Mated spermatheca	5 ± 1	0 of 4	0.17	Down
Adult carcass	31 ± 3	4 of 4	1.00	None
Larval CNS	7 ± 0	1 of 4	0.22	Down
Larval Salivary gland	8 ± 0	0 of 4	0.29	Down
Larval midgut	6 ± 1	0 of 4	0.21	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	5 ± 0	0 of 4	0.18	Down
Larval fat body	2 ± 1	0 of 4	0.10	Down
Larval trachea	18 ± 19	1 of 4	0.59	None
Larval carcass	4 ± 2	0 of 4	0.15	Down
S2 cells (growing)	25 ± 2	4 of 4	0.81	None
Whole fly	31 ± 1	4 of 4

Looking for CG1725-RD. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720