FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG17342-RA through 18771 annotations produced 1 hits

Lk6 (Lk6):

Annotation Number : CG17342
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0017581
Gbrowse : chr3R:7578505-7590179 (-) // 100.0 //
Probeset : 1641654_a_at
Accessions : protein= NP_651986; /// NP_731624;, nucleotide= NM_143729; /// NM_169423;
Pathway : 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 000
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0017581.
Homophila reports that CG17342 is a close match (9e-11) to human gene MAPK10;PRKM10;JNK3 (NP_620447), a gene associated with Epileptic encephalopathy, Lennox-Gastaut type, 606369 (3).
BioGrid reports that CG17342 interacts with CG7434 CG17360 CG17489 CG17667 CG2709 CG3492 CG4466 CG7386 CG8247 CG9277 CG9375 .
TRiP has 2 RNAi stocks for FBgn0017581 available for purchase.
VDRC has 4 RNAi stocks for FBgn0017581 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1468 ± 39	4 of 4	1.30	Up
Head	1919 ± 91	4 of 4	1.70	Up
Eye	4362 ± 263	4 of 4	3.87	Up
Thoracicoabdominal ganglion	1897 ± 52	4 of 4	1.70	Up
Salivary gland	4243 ± 137	4 of 4	3.76	Up
Crop	2193 ± 46	4 of 4	1.90	Up
Midgut	890 ± 35	4 of 4	0.80	Down
Tubule	991 ± 64	4 of 4	0.90	Down
Hindgut	1600 ± 10	4 of 4	1.40	Up
Heart	2228 ± 204	4 of 4	1.98	Up
Fat body	1336 ± 154	4 of 4	1.18	None
Ovary	814 ± 14	4 of 4	0.70	Down
Testis	385 ± 14	4 of 4	0.30	Down
Male accessory glands	1992 ± 67	4 of 4	1.80	Up
Virgin spermatheca	1841 ± 53	4 of 4	1.63	Up
Mated spermatheca	1277 ± 89	4 of 4	1.13	None
Adult carcass	2251 ± 116	4 of 4	2.00	Up
Larval CNS	924 ± 84	4 of 4	0.82	Down
Larval Salivary gland	906 ± 108	4 of 4	0.80	None
Larval midgut	1107 ± 41	4 of 4	0.98	None
Larval tubule	990 ± 22	4 of 4	0.90	Down
Larval hindgut	1247 ± 61	4 of 4	1.11	None
Larval fat body	784 ± 26	4 of 4	0.70	Down
Larval trachea	1550 ± 143	4 of 4	1.37	Up
Larval carcass	830 ± 65	4 of 4	0.74	Down
S2 cells (growing)	1520 ± 45	4 of 4	1.35	Up
Whole fly	1127 ± 43	4 of 4

Looking for CG17342-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720