FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1747-RA through 18771 annotations produced 1 hits

Sphingosine kinase I (Sk1):

Annotation Number : CG1747
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030300
Gbrowse : chrX:11337571-11340043 (+) // 100.0 //
Probeset : 1624404_a_at
Accessions : protein= NP_572717; /// NP_727528;, nucleotide= NM_132489; /// NM_167286;
Interpro : 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase ac
FlyMine data for FBgn0030300.
BDGP gene expression has embryonic in situ data for Sphk1: 10 pix of staining in 2 body parts.
BioGrid reports that CG1747 interacts with CG9423 .
TRiP has 1 RNAi stocks for FBgn0030300 available for purchase.
VDRC has 2 RNAi stocks for FBgn0030300 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	43 ± 4	4 of 4	1.40	Up
Head	50 ± 2	4 of 4	1.70	Up
Eye	11 ± 1	2 of 4	0.39	Down
Thoracicoabdominal ganglion	78 ± 2	4 of 4	2.60	Up
Salivary gland	94 ± 2	4 of 4	3.18	Up
Crop	317 ± 10	4 of 4	10.70	Up
Midgut	200 ± 10	4 of 4	6.80	Up
Tubule	15 ± 1	3 of 4	0.50	Down
Hindgut	221 ± 6	4 of 4	7.50	Up
Heart	10 ± 0	1 of 4	0.36	Down
Fat body	42 ± 10	4 of 4	1.44	None
Ovary	7 ± 1	3 of 4	0.30	Down
Testis	6 ± 0	3 of 4	0.20	Down
Male accessory glands	28 ± 2	4 of 4	1.00	None
Virgin spermatheca	50 ± 5	4 of 4	1.70	Up
Mated spermatheca	74 ± 6	4 of 4	2.50	Up
Adult carcass	36 ± 1	4 of 4	1.20	None
Larval CNS	10 ± 2	4 of 4	0.35	Down
Larval Salivary gland	10 ± 1	2 of 4	0.36	Down
Larval midgut	222 ± 11	4 of 4	7.51	Up
Larval tubule	18 ± 1	4 of 4	0.60	Down
Larval hindgut	132 ± 15	4 of 4	4.46	Up
Larval fat body	31 ± 3	4 of 4	1.10	None
Larval trachea	25 ± 6	4 of 4	0.87	None
Larval carcass	51 ± 5	4 of 4	1.75	Up
S2 cells (growing)	48 ± 3	4 of 4	1.64	Up
Whole fly	29 ± 3	4 of 4

Looking for CG1747-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720